Gossypium arboreum (tree cotton): 108453400
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Entry
108453400 CDS
T05776
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108453400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108453400
03036 Chromosome and associated proteins [BR:
gab03036
]
108453400
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108453400
Coactivators
SAGA/TFTC/STAGA complex
108453400
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108453400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
108453400
NCBI-ProteinID:
XP_017606965
UniProt:
A0A0B0MZN5
LinkDB
All DBs
Position
5:complement(25861267..25866711)
Genome browser
AA seq
941 aa
AA seq
DB search
MDPSIVKLLEEEEDESMHSGADVEAFQAALNRDIEGDASNSQHSGSNIAVLSQGSNPASS
QSVAQWPASGQDGNSNFQNQQVLQSAQQQQQTLSESEQKQHGAVVTGSQQQVQQPNDVPK
EHSRLPPQQKQPQEDHPQGVTEQIPAPVPQTTGIQSQTTEKSPISREPERTNNQDSESQY
AKLQKLSNQQASGAEQPNSPMNRGKQVPFAVLLPALLPQLDKDRAMQLHTLYGKLKKNEI
AKDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSPAGLRQNTPRMPSVGSATQFAG
PHSLAQLHQKGPNSPANSSHAPSTPVPMQTNSSYLSGENKAQKSQDMDRQSDSRFGMLGS
QISSTGSTTVNQERGRPSIPAQGINKQQQQHLNFPQTSFAMYGSNNYHTYSGPNVNTSGS
SLKPQPHDSQMRPTAHQSMGSNPTVGGSTQAMNMMSGPKLERQNSSNDPNRLQGTSLSHF
SSGSVPWQASPSKELNPGPFSSATYVKQESADQGADQHRSHLPATQGVSTTLAEQGKAVT
TTAKDEPGEKQSSRVAFTTTPSITAQLDSNVLLGSRNPSVPAPTGMNARTPQKKPSIGQK
KPLEALGSSPPPSSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLLSGPKDESRVS
EASRRVVQEEEERLFLKKTPLQKKLAEIMAKSGLKNISNDVERCLSLSVEERMRGLICNL
IRLSKQRVDIEKPRHRTVITSDVRQQIMMMNQNARGEWEKKQAEAEKLRKLNEPEAETAF
DGDKEKDDSRVKAVKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGG
TDAASGSQASKDANRRPLSASGKSTKDNQESEKRGPLNPHGSGTSKKFGRNQGTTLTAHA
RVARTISIKDVIAVLEREPQMSKSTLIYGLYEKTCSESKAE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccatagtgaagctccttgaagaagaagaggacgagtctatgcattctgga
gctgacgttgaggctttccaggccgcgttgaatcgagacattgaaggcgatgcgtcgaat
tctcagcattctggttcaaatatcgcagttttgtctcaaggaagcaatccagcttccagt
caatcggttgcgcaatggccggcctcggggcaagatggaaactccaactttcaaaatcaa
caagtccttcaaagtgcacagcaacagcagcaaactttgtctgaatcagagcaaaagcaa
cacggagctgttgtcactggaagtcagcaacaagtgcaacagccaaatgatgttccaaaa
gaacatagtcgtctaccaccacaacaaaaacaaccccaagaggaccatccacaaggagtg
accgaacaaattcctgccccagttcctcaaactactgggattcagagccagactactgaa
aaaagtcccatctcgcgtgaacctgagagaaccaataatcaagacagtgaatcacaatat
gcgaaattacagaagctgagtaatcagcaggccagcggagcagagcagccaaatagtcct
atgaatcgaggaaaacaagttccatttgccgtgttgttgcctgctttactgccccaactt
gataaagatagagccatgcagcttcatactctgtatggtaaactaaagaaaaatgaaatt
gcaaaagacggatttgttaggcacatgagagatattgtaggagatcagatgctgaggttg
gcggttaacaagttacaagttcagatgagttccaatcaattcccattacagtccccagca
ggattacggcagaatactcctcggatgccctctgttggcagtgccacacagttcgctggc
ccacattcattagctcagctgcaccaaaagggtcctaattctcctgccaattcatctcat
gccccctctacaccagtccccatgcagactaattcaagttatttatctggtgaaaacaag
gctcaaaaatctcaagacatggatcgccaatcagattctcgctttggaatgctaggtagt
caaatttcttccactggttcaaccactgtgaatcaagaaagaggtcgtccttcaattccg
gcacaaggaattaacaagcaacagcaacaacatttgaatttcccacaaacttcattcgcc
atgtatgggagtaataattatcatacatattctgggccaaatgttaatacttcgggttcc
tctttaaagcctcaacctcatgattcacaaatgaggccaactgcacatcaaagcatggga
tcaaatcctactgtaggaggatcaacccaggcaatgaacatgatgagtgggcctaagctt
gagaggcaaaactctagtaatgacccaaatagattgcagggcacatcactttctcacttt
tctagtggttcagttccttggcaagcctctccgagtaaggagctgaatcctggccctttt
tcatcagcgacatatgtgaaacaggaatctgctgatcaaggtgctgaccagcacagatct
catttgcctgcaacccagggagtctcgactacactagctgaacaagggaaggcagttaca
actactgcaaaggatgagcctggagagaagcagtcttctagagttgccttcacaacaaca
ccctccatcacagcacaattggattctaatgtcctgttgggctctaggaatccatctgtg
cctgctccaactgggatgaatgcaagaactcctcaaaaaaagccttctattggccagaag
aaaccactggaagctcttggttcatcaccaccaccatcaagtaagaagcaaaaagtgtct
ggagcattttcagatcagagcattgaacaactaaatgatgtcactgctgtcagtggagtc
aatctcagggaagaagaggagcaactattgtctggtcccaaggatgagagtcgagtttca
gaagcatccagaagggttgtgcaagaggaagaagaaagactatttttgaagaaaacccct
ttgcagaagaaattggctgaaattatggccaaaagtggtttgaagaatataagcaatgat
gttgaacgatgcttgtccctgagcgtggaggaaagaatgcgtgggctcatatgcaattta
atcagactgtcgaaacagcgtgttgatattgagaagcctaggcaccggacagttatcacc
tcggatgttcggcagcaaattatgatgatgaaccagaatgctaggggagaatgggagaaa
aagcaggctgaggcagagaagctccggaaacttaatgaacctgaggctgagactgccttt
gatggtgacaaggagaaagatgacagtcgagtaaaagcagtaaaggtaaataaggaggag
gatgacaagatgaggaccactgctgcaaatgttgctgctcgtgctgctgttgggggggat
gacatgctgtcaaaatggcagcttatggctgagcaagctcgccagaaacgtgagggagga
acggatgcggcatctggttcacaggcaagtaaagatgcaaaccgcaggcctttatctgca
tctgggaaaagtacaaaggacaatcaagaatctgaaaagaggggccctcttaatcctcat
ggatctgggacaagcaagaaatttggccggaaccaaggtacgacactcacggcccatgct
agagtggctcgtactatttccattaaggatgtgattgcagttctggaaagagagccccaa
atgtcaaagtctacacttatttatggcttgtacgaaaaaacctgctccgaatctaaagcg
gagtga
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integrated database retrieval system
