Gossypium arboreum (tree cotton): 108453531
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Entry
108453531 CDS
T05776
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108453531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108453531
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108453531
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
U-box type E3
108453531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
Neurochondrin
zf-RING_UBOX
MLKL_N
zf-C3HC4_4
Arm_2
KAP
zf-Nse
HEAT_EZ
MCAfunc
zf-C3HC4_2
zf-C3HC4
HEAT_EF3_GNC1
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108453531
NCBI-ProteinID:
XP_017607166
UniProt:
A0A0B0NSE1
LinkDB
All DBs
Position
5:7225709..7230555
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AA seq
671 aa
AA seq
DB search
MEEEKGELVRSLIDAVNQIAPIGDYRCAVKKEFCNLARRLKLLTPMFEEIRESKEQIPEE
TVKALVSLKEALVSAKELLRFGSEGSKIYLVLERDQIMHKFHEVTARVEQALSGISYENL
DISDEVKEQVELVLAQFRRAKGRVDVPDVELYEDLLSLYNKSNDAAADPDVLRRLAEKLQ
LVGIAELTQESLALHEMVSASCGDPGETFEKMSNLLKIIKDFVQTENPNLDASAREKNLP
SSSGQATTDGNHKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCPK
TQQTLSSPALTPNYVLRSLIAQWCEANGIEPPKRPGSSRPNKVTSACSPAERTKIEILLC
KLASSSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVTLLSTPDSRTQEHAVTALL
NLSICEENKGSIISFGAVPSIVQVLKKGSMEARENAAAALFSLSVVDENKVTIGASGAIP
PLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALA
ILAILSSHPEGKSAIGAAEAVPVLVDVIGNGSPRNRENAAAVLVHLCAGDQQHLAEAQEL
GVMGPLLDLAQNGTDRGKRKAAQLLERMSRFVEQQKLAQAQAEAHAQQSQSQSQSEIQQP
HPPSVAYTVNR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagagctggtgcggagcttgatcgatgcggtgaaccagatagct
ccaatcggcgattacagatgcgccgtgaagaaggagttttgcaatctcgctaggagattg
aagctgttgacgccaatgttcgaggagattagagaaagcaaagagcaaatccccgaagaa
actgttaaagctctggtctcgctgaaagaagctttggtttcggctaaggagttgctcagg
tttggcagtgaaggcagcaagatttacctggttctagagagggatcagattatgcataaa
tttcatgaagtgacagctcgggtggagcaagctttgagtggaatttcgtatgagaatctt
gacatatcagatgaagttaaggaacaggtggagcttgttctagctcagttcaggagagct
aaaggaagggttgatgttccggatgttgaactgtacgaggatctattatcactctacaat
aaaagcaatgatgctgcagcagatccagatgttctaaggagattagccgagaagttacaa
ttggttgggatagctgaacttacgcaagaatcactagctctacatgagatggtttctgcc
agttgtggagatcctggggaaacatttgaaaagatgtcaaacttactaaagataatcaag
gattttgtacagacagaaaatcctaatttggatgcttctgcaagggaaaagaatcttcct
agtagtagtgggcaagcaaccactgatggaaatcacaagactccagttataccagatgat
ttccgctgtccaatatccctggagttgatgaaggaccctgtcattgtttccacagggcag
acttatgaacgttcttgcattgagaaatggctggagcaaggtcacggaacatgtccaaag
acacaacagaccctcagtagccctgctcttacgcccaattatgtattgcgtagtctaata
gctcaatggtgtgaggcaaatggcattgagccgcctaaaagacccggtagttctcgaccc
aataaagtcacatctgcctgctcacccgctgaacgtaccaagattgaaattctcctctgt
aagcttgcatccagcagtcctgaagatcaaagaatggctgcaggtgaaatccgtcttctt
gccaaacgaaatgcagataatcgtgtggcaattgctgaagctggggccatacctctcctt
gtgaccctcctttcgacacctgattcacggacccaagaacatgctgtaacggcactcctt
aacctttccatttgtgaagagaacaaaggaagtatcatatcttttggagcagttcccagt
atagtccaggtgcttaagaagggaagcatggaagctagagagaatgcagcagctgctctc
ttcagcctctcagtagtggatgaaaataaggtgacaattggtgcctcaggagcaattcct
cccctagtgacattgctaagtgaaggcacacaaagggggaaaaaagatgcagcaacagca
ctctttaatttgtgcatttaccaagggaacaagggaaaagcagtgagagccggagttgtc
ccaacattaatgcgtttgttgacagaacctggaggaggaatggtggatgaggcattagcc
atacttgcaatactctctagccacccggaaggtaagtctgccataggagcagcagaggca
gtgccagttttggtagatgttattggtaatggatctcctaggaatagggagaatgcagct
gcggttttggtgcacctctgtgccggagaccaacagcatttagcagaggcccaggaacta
ggagtgatgggtcctttgttggacttggctcaaaatggtacagatagggggaagcggaag
gctgctcaattgcttgagcgcatgagcaggtttgttgagcagcaaaagcttgcacaggcg
caagctgaggcccatgctcaacagtcccagtctcagtctcagtctgagattcaacaacca
cacccaccctctgtggcatacactgttaatagatga
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