KEGG   Gossypium arboreum (tree cotton): 108453596
Entry
108453596         CDS       T05776                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03030  DNA replication
gab03410  Base excision repair
gab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108453596
   03410 Base excision repair
    108453596
   03420 Nucleotide excision repair
    108453596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gab03032]
    108453596
   03400 DNA repair and recombination proteins [BR:gab03400]
    108453596
Enzymes [BR:gab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108453596
DNA replication proteins [BR:gab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    108453596
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      108453596
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 108453596
NCBI-ProteinID: XP_017607285
LinkDB
Position
5:complement(6144179..6163866)
AA seq 2204 aa
MNGGDNRRPDRRDLWRSKKQKLIRSAEEELESKLGFDLFTEGEKRLGWLLTFASSSLEDS
DAGKVYSCVDLYFVSQDGSCFKSKFKFRPYFYAAAKNKAEMDVEAYLRRRYETQIAGIEI
VEKEDLDLKNHLSGLHKRYLKISFDTVQQLMDVKRDLVHVVERNRTKFDAAEAYESILMG
NREQRPLDLLDLLVDLREYDVPYHVRFAIDNDVRCGQWYNVSVSSTGVMLEKRTDLLQRA
EVRVCAFDIETTKLPLKFPDAEYDSIMMISYMVDGQGYLIINRECVGQDIEGLEYTPKPE
FQGFFKVTNVKNEIELLRLWFTHMQEVKPGIFVTYNGDYFDWPFIEKRAAYHGFKMSDEI
GFRCDENQGECQAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVQ
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDAEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLNPSGY
EQLISNLDRDLQYAIRVEGKMDLESVLNYDEVKNEIMEKLVKLRDEPIREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTDEVCTACDFNRPDKTCLRKLEWVWRGEIFMAKKSDYYHLK
KQIESEFFDGTDNQLSKSFLDLPKLEQQSRLKDRLKKYCQKVYRRVLDKPVTELREAGIC
MRENPFYVDTVCSFRDRRYEYKGLNKVWKGKLSEAKAGGNPMKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCA
LPGSFPENFTFKTNDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVNPVNKTYTTHSECS
IEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLNGSTLEECYSAVAVVANRWLDLLDSQGKDIADSELLDYISESSTMSKSLADYGE
QKSCAVTTARRLADFLGDAMVKDKGLHCQYIVACEPRGTPVSERAIPVAIFETDPEIMKF
YLRKWCKTSSDVGIRSIVDWLYYKQRLSSAIQKIITIPAAMQKVTNPVPRVAHPDWLHKR
VREKEDKFRQRKLVDIFGSSVRNDTVKKANDAVLTTDVVGDLEDFQNKRGSKKGPVPIVR
SYEVNKDQGPIEAAVQGNTMQHQTDHRGSEQNLSSILQPNVQSTENIDRNVDYQGWLELK
KRKWKDNLEIRKRQRLSNLRTSHHVSHNSEMLGAMENHKDASGRAGVGSYFRRHEVSLTN
SYWQIMQLVPGSQNGQFFAWVVVEGIMLKVPITVPKVFYLNSKATISENFPGRRVNKVLP
HGRHSYNLFEVIIDEDQFRRESKKLAALLADPEIEGIYERKIPLEFNAILQLGCVCKVDK
TAKKRNAQDGWRLSELHMKTTTECAYLEQAIPFFYLYHSICEGRAIYAAYFSSSGAVFVV
VVNPYHESESISPYILEKYFREACQALSIEPPTRNGISFKVNYVEHVKDAEKNLQRAISE
HRHEHQGPILAVIECPNTQMMKSGIQALEDFPCVSIPSNARDNDYQLLVWQQTAAKIGMQ
RCSASSQWLSERISLSRYAHVPLGNFQSDWLLYTADVFYSRALRDQQQVLWISDDGVPDL
GGIGEEDTCFADEVCQPVITYPGAYRKVSVELKIHNLAVDALLKSNQINEMEGGALLGFD
QDVHSGNEQCGFDEANASAAAFRVMKQLIQRCLADAVSSGNVFADAILQHLYRWLCSPQS
KLHDPTLHRILHKVMQKVFALLLAEFRKLGATIIFADFSKVIIDTGKYDISAAKAYCDSL
LKALQSRELFEWIELEPIHFWHSLLFMDQYNHGGILAESHENSQEKSEVDIVSNWNIAQY
LPEKIQDHFVLIVSEFLHTPWKYAQEQAANRKSSLDGSLCTPSITITAAENFEAHIVQYL
KGQISSYFTEKLLGIVRDIVLHMKGLNGSGKVGQQSVHNVPHKGDAALEFIKHVCTVLAL
DHSIQHDVLVLRKNLLKYVHVKEFAPEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSA
LLADEWCCAVPQCGQPYDLEVMENALLQIVRQRERLYHLQDLVCCRCRQVKAAHLAEQCG
CAGSFKCKEDVSEFRSKMQIFLNIAIRKKFQLLQECTSWILQIN
NT seq 6615 nt   +upstreamnt  +downstreamnt
atgaatggcggagataaccgacggccggaccggcgagacctttggagatcgaagaagcag
aagctaatccgcagcgcagaagaggagctcgagtccaagcttggctttgatctcttcact
gaaggggaaaaacgcctcggatggttacttactttcgcttcgtcatctttggaggattcg
gatgcaggaaaagtatatagttgcgtcgatctttactttgtttctcaggatggttcttgt
tttaagtcaaagttcaaattccgtccttacttttacgcagctgcaaagaacaaagcagaa
atggatgtggaagcctatttgagacgacgatatgaaactcaaattgcagggattgaaatt
gtggagaaggaagatcttgatcttaaaaaccatttgtctggtctacacaaacgttattta
aaaatatcttttgatactgttcaacaattgatggatgtgaagagagatctagtgcatgtt
gttgaaagaaaccggacaaaatttgatgctgctgaagcatacgagtcgatattaatgggg
aatagagaacaaaggccactagatcttttagatcttctagttgatctccgtgaatatgat
gttccttaccatgttcgttttgccattgacaatgatgtgagatgtggccagtggtacaat
gtaagtgtttctagtactggagtcatgctagagaagagaactgatcttttgcaacgtgct
gaagtgcgtgtctgtgcatttgatattgagacgacaaagcttcctttgaaatttccagat
gccgagtatgattcaataatgatgatatcatacatggttgacggacaaggttacttgatt
attaacagagagtgtgtagggcaagacatagagggcttagagtatactcctaaaccagaa
tttcaaggatttttcaaagtcacaaatgtgaaaaatgagatagaacttctacggctgtgg
tttacccacatgcaagaggtcaagcctggtatttttgttacatacaatggtgattatttt
gactggccattcatagaaaaaagagctgcttatcatggatttaaaatgagtgatgaaata
gggtttcgatgtgatgaaaatcagggggaatgtcaagccaaatttgcttgtcatttggat
tgttttgcttgggtcaaacgtgatagttatcttcctcaggggagtcatggcctcaaggct
gttacaaaggcaaagctcggttatgatccactagaggtgaatccagaggatatggttcaa
tttgcaaaggaaaagccccagatgatggcctcctattctgtttctgatgctgttgcaact
tattacttgtatatgacctatgttcatccctttattttctctctggcaactattattccc
atgtcacctgacgaggttttgcgcaaaggaagtgggacactttgcgaaatgcttctgatg
gttcaggcctacaaggcaaatgttatctgccctaacaaacaccaatcggatgctgagaag
ttctataagaatcaccttcttgagagtgagacctatataggtggccatgtggaatgcctt
gaaagtggtgttttcagatctgatcttccaactagctttaagcttaacccatctggctat
gagcaactgatcagtaatcttgaccgagatctacagtatgctattagagttgaggggaag
atggacttggaatcagtcttgaactacgacgaagtaaagaatgaaataatggaaaagctt
gtgaagttacgagatgaacctatccgtgaagaatgccctctcatttatcatttagatgtt
gctgcaatgtacccgaatattattttgacaaacaggcttcagccaccatcaatagttaca
gatgaggtctgtactgcatgtgatttcaatcgtccggacaagacttgcctccggaaactt
gaatgggtttggcgtggggagatattcatggcaaagaaaagtgattattaccacctgaag
aagcaaatcgagtctgaattttttgatggtactgataatcagttgtcaaaatcttttctt
gacctgcctaaactggagcagcagtccaggctgaaagaccgattgaagaaatactgtcag
aaggtttacagacgggtattggacaagccagtcactgaacttcgagaagcagggatctgt
atgcgtgaaaaccccttttatgttgacacagtttgcagctttcgagatagaaggtatgaa
tacaaaggactgaataaagtttggaaagggaagctgtctgaagccaaggctggcggaaac
cctatgaagatccaagaagcacaagacatggtagtgctttatgattccttacaacttgcc
cataagtgtattctgaactcattctatggatatgtcatgcgcaaaggtgcgagatggtac
tcaatggaaatggctggtgtagttacatatactggtgctaaaatcattcagaatgcccgc
ttacttgttgaaaaaattgggaaaccacttgaattagacacagatggtatctggtgtgca
cttcctgggtcttttccagaaaattttacttttaaaactaatgacttgaagaagaagctg
actatctcttatccatgtgttatgcttaatgttgatgtggcaagaaataatacaaatgat
cagtaccagacacttgtgaatcctgtcaataaaacatacacaactcatagtgaatgctca
attgaatttgaagtagatggcccatacaaggcaatgattatacctgcgtctaaggaagaa
ggaatattaatcaagaaaagatatgctgtttttaatgatgatggaacccttgcggaactg
aaaggttttgagataaagcgtagaggtgagctgaaactcatcaaagttttccaggcagag
ctttttgataagttccttaatggatccaccttagaggaatgctattcagctgtcgctgtt
gttgcaaaccgctggcttgatcttcttgatagtcaaggaaaggatattgcggatagtgag
ttattggattacatatcggaatctagcacaatgagcaagtctttagcagattatggtgaa
caaaagtcatgtgcagtgaccacagcaaggcgtcttgctgattttcttggtgatgctatg
gttaaagataaaggactgcactgccagtatatagtggcatgtgaaccaagaggtacacct
gttagtgaacgtgctattcctgttgcaatatttgaaactgatcctgaaataatgaagttc
tatctacgcaagtggtgcaaaacttcttcagatgttggcatacgttctattgttgattgg
ttgtattacaagcaacggcttagctcggcaattcagaaaattatcactatacctgccgca
atgcaaaaggttacaaatcctgtcccaagggtcgctcatcctgattggcttcataaaagg
gttcgtgagaaggaggataaattccgtcaaagaaagttggttgatatctttggctcatca
gttagaaatgatacagtgaaaaaggcaaatgatgctgttctcaccacagatgtggttgga
gatctagaagacttccaaaacaaaaggggttctaagaaaggacctgtaccaattgttcgt
agttatgaagtgaataaggatcaaggtccaatcgaggcagctgtccaaggcaatactatg
caacaccaaactgatcatagaggaagtgagcaaaatttgtcgtcaatattgcagccaaat
gttcaatccactgaaaatattgacagaaatgttgactatcaaggatggcttgaactgaag
aagaggaaatggaaggataatctggaaataaggaagaggcaaaggttgagtaatctaagg
acatcacatcacgtcagtcacaattctgaaatgctgggtgccatggaaaaccataaagat
gcctctggaagagctggtgttggttcatattttagaagacatgaagtatctctaacaaat
tcctattggcagattatgcagctagttccaggttcacagaatggtcaattttttgcttgg
gttgttgttgaaggaattatgcttaaggttcctataactgttccaaaagtgttctatttg
aactctaaagcaactatatcagaaaattttcctggaagacgggtaaacaaggttctgcct
catggaaggcacagctataacctatttgaggttataattgatgaagatcagtttaggagg
gagagcaagaagcttgctgctcttcttgctgatccagaaattgagggaatttatgaaaga
aagattccgctggagtttaatgctattctccagcttggttgtgtttgtaaagtagataag
acagccaagaaacgaaatgcccaggatggttggagactgagtgaactgcacatgaagact
acaactgaatgtgcatatctggagcaggcaatccctttcttttacttgtatcatagtatt
tgtgaaggccgtgccatatatgctgcttatttttcttcatcaggagcagtgtttgtggtg
gtagttaatccttaccatgaaagtgaaagtatatctccatatatccttgaaaaatatttt
cgcgaagcttgccaggcattgtctattgaaccaccaactcgtaatggtatttctttcaag
gtgaactatgttgaacatgtcaaggatgctgaaaaaaatttacaaagagctataagtgaa
cacaggcatgaacatcaaggacctattctcgctgtcattgaatgcccaaatactcaaatg
atgaagtcaggtatacaagctctagaagatttcccttgtgtgagcataccttccaatgct
cgtgataatgattatcagcttcttgtatggcaacaaacagcagcaaaaattggaatgcag
cggtgttctgcatcatctcagtggttgagtgagaggatctctctctcaagatatgcacat
gtacccttgggcaattttcaatctgattggctgttatatacagcagatgtcttctattct
agagccttgcgtgatcagcaacaggtactctggatatctgatgatggtgttcctgaccta
ggaggcattggtgaagaagatacatgttttgctgatgaggtctgtcaacctgttatcaca
taccctggagcatacagaaaagtttccgtggagctaaagattcataacctggctgtagat
gctcttcttaaaagcaaccaaatcaatgaaatggaaggaggagctttattaggatttgac
caagatgtgcattctggaaatgaacagtgtggttttgatgaagctaatgcatccgctgct
gcatttcgagtcatgaagcaactgatacagaggtgccttgctgatgcagtttcctctgga
aatgtgtttgctgatgcaatactgcaacatctttatcggtggctttgcagtcctcagtca
aagcttcatgatccaactcttcaccgcatactacacaaggtcatgcaaaaggtgtttgct
ttgctgttggccgaattccgcaaattgggtgccaccattatatttgcagacttctccaag
gttatcattgacacaggaaaatatgatatatcagcagctaaagcttattgtgatagcttg
ctgaaagctctgcagagtagagagctatttgaatggattgaacttgagccgattcacttc
tggcattccttgttatttatggatcagtataaccatgggggaatcttggcggaatctcat
gaaaattcacaagaaaagtcagaagtggatattgtttctaactggaacattgctcagtat
ttacctgagaagattcaggatcattttgttttaattgtctccgagtttctgcatactccc
tggaaatatgcacaggagcaagctgcaaatagaaaatcctctctggatggcagcttatgc
actccatcaatcactattacagctgctgagaattttgaggcccatatcgtacaatatctc
aaagggcagattagctcctacttcacagaaaaacttctagggattgttcgtgatattgtg
cttcatatgaaagggttgaacggatctggaaaagttggtcaacagagtgtgcataatgtt
cctcacaaaggagatgctgcactggagttcattaagcatgtctgtactgttctggccctt
gaccatagtattcagcatgatgttctggtgttaaggaagaatctactgaaatatgtacat
gtcaaggagtttgctcccgaagctgagtttcatgatccatgtccttctttcatcttaccc
aacgtgatttgcagctattgcaacgactgtagagacctggatttatgccgggactcggct
ttactggctgacgagtggtgctgtgctgtgccccagtgtgggcagccttatgatctggag
gtgatggagaatgcacttttgcaaattgtacgacaaagagaaagactgtatcatctacag
gatctagtgtgctgtaggtgcagacaggtgaaagcagcacatttagcggaacaatgcggg
tgtgcagggtcttttaaatgcaaggaagatgtatctgagtttcgcagcaaaatgcagata
ttcttgaacatagccattcgtaaaaagtttcaactcctccaggagtgtacttcatggatc
ttacaaatcaactag

DBGET integrated database retrieval system