Gossypium arboreum (tree cotton): 108453765
Help
Entry
108453765 CDS
T05776
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108453765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108453765
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108453765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_25
AAA_16
AAA
AAA_28
Rad17
RsgA_GTPase
DO-GTPase2
TIP49
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
108453765
NCBI-ProteinID:
XP_052883732
LinkDB
All DBs
Position
5:complement(9987650..9995654)
Genome browser
AA seq
1467 aa
AA seq
DB search
METGDILKASNSLRGSLRAGSLRSGSSSVWRNSAVDVFSRSSREEDDEEALKWAAIERLP
TVARLRKGILTSSQGGANEIDIVNLGWQERRTILERLVKVADEDNERFLWKFKNRIDRVG
IELPTIEVRFENINIEAEAFVGTNALPSFLNFITSIFEGLLINMGILSSRMKKLTILKDV
SGMIKPGRMTLLLGPPSSGKTTLLLALAGKLDPALQFSGSVTYNGHTMKEFVPQRTAAYI
SQFDLHLGEMTVRETLAFSARCQGVGTRYDMLSELSRREKQANIKPDPDIDVFMKAIATE
GQEANVITDYIMKILGLDICADTLVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEIS
TGLDSSTTFQIVNSLRQTVHILNGTALISLLQPAPETYDLFDDIILLSDSVIVYQGPREH
VVSFFESMGFKCPERKGVADFLQEVTSRKDQMQYWARKDQPYRFITANEFAEAFQTFHVG
MKLGEELGTPFDKKKSHPAALTTKKYGVGKWELLKACIAREFLLMRRNSFVYIFKCIQLT
IVSCITMTLFLRTEMDRDSVQGGRIYMGALFFGMIFIMFNGMPELSMTITKLPVFYKQRD
LLFFPPWAYALPSWILKIPMTFIEVSVWVFITYYVIGYDPNVERFFRQYLLLVLINQMAS
SLFRFIASAARNMIVANTFGTFALLVLFALSGFILARDKIRGWWIWGYWISPLMYGQNAL
MVNEFLGHQWSRVPPGSNESIGLQVLKSRSFFHESYWYWLGVGALAIFVVLLNVFFTLAL
TFLKPFEKNRAVISEKPESNDQANGVVGSIQLTDREKSSSHVNRSEIQDDIQRSASSSKS
FSLSDATLRTNGKKKKGMVLPFEPHSLTFEDIYYSVDMPQEMKEQGITEDDRLVLLKGIS
GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITVSGFPKQQETFARVSGYCEQ
NDIHSPHVTVYESLLYSAWLRLSNDIDAETRKMFIEEVMELVELDSLRHALVGLPGVNGL
STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS
IDIFEAFDELFLMKRGGQEIYVGPLGHHSKYLIRYFEGIQGVSKIKDGYNPATWMLEVTA
SAQELSLGVDFADIYKNSDLYRRNKALIEDLSKPAPGAKELYFPTQYSQSFLTQCTACLW
KQHWSYWRNPPYTAVRFLFTTVIALMFGTLFWDLGSKTKKIQDLSNAMGSMYAAVLFIGI
QNSSSVQPVVSVERTVFYRERAAGMYSAMPYAIAQVLVEIPYIFVQASVYGIIVYSMIGF
EWTATKFFWYLFFMLFTLLYFTYYGMMAVAVTPNHHIAAIVSSAFYGLWNVFSGFIIPRP
SIPVWWRWYYWICPVSWTLYGLFVSQFGDINELLEDGNNETVKQYLRNNYGFRHDYLGLV
AAVIMSFAVLFGTIFAVAIKMFNFQRR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagatattcttaaagcgagtaacagtttacggggaagtttacgagcagga
agtttgagatcaggaagctcttccgtatggagaaacagtgcggtggacgtgttttcaagg
tcttctcgagaagaggatgatgaagaagctttgaagtgggctgctattgagagactacca
actgttgctcgtctcaggaaaggtatattgactagctctcaaggtggtgccaatgaaatt
gatattgttaaccttggatggcaagaaaggaggactatactagagaggttggttaaagtt
gctgacgaagataatgaaaggttcttgtggaagttcaagaaccgtatagatagggttggc
atcgagcttcccacaatcgaagtcagatttgaaaatataaatattgaagctgaagctttt
gtaggaaccaatgctttgccttcattccttaatttcattactagcatatttgagggcttg
ttgataaatatgggtattctttctagtagaatgaaaaagctgaccatcctcaaagatgtc
agtggtatgattaaacctggcaggatgacattgcttttgggtcctccaagttccggaaaa
accactctcttgttggctctggccgggaagcttgatcctgctctccaattttcggggtct
gtgacatacaatgggcatacaatgaaggagttcgtgcctcagagaactgcagcctatatc
agtcaattcgatcttcacctaggagaaatgaccgtgagagaaactttggccttttctgca
agatgccaaggggttggaacccgatatgatatgttgtcagagttgtcaagaagagagaaa
caagcaaacattaaacctgatcctgatattgatgtcttcatgaaggcaatagcaacagaa
gggcaggaagcaaatgtaatcactgattatattatgaagattttaggcctggatatatgt
gcagacactttggtaggaaatgaaatgttgaggggcatatctggaggacaaaggaagcgt
gtcacaacaggtgaaatgctggtaggaccagccagagcactgtttatggatgagatatct
actggtctggacagctctacaacattccaaattgtgaactcccttaggcaaactgttcat
attcttaatggaactgcactcatctcccttctacagccagctccagagacttacgatctt
tttgatgacattattctcctttctgatagcgtgatagtatatcagggtcctcgtgaacac
gtggtgagctttttcgaatctatgggctttaagtgccctgagagaaaaggtgtggctgat
ttcttgcaagaggttacatcaaggaaagatcaaatgcagtattgggcacgtaaagatcaa
ccttacaggtttatcacggctaatgaatttgctgaggcattccaaactttccatgtggga
atgaaacttggggaggaacttggaactccatttgataaaaaaaagagccacccagctgct
ttgacaaccaaaaaatatggtgttgggaagtgggagttgctaaaagcttgcattgcaagg
gaatttctgttgatgaggagaaactcttttgtgtacatcttcaagtgtatacaactcaca
atagtgtcctgtattaccatgacactctttttgaggactgagatggatcgagattcagtt
caaggaggaaggatctatatgggggccttgttttttggtatgatttttatcatgttcaat
ggaatgcctgagctttctatgaccattactaagctccctgtcttttacaagcaaagagac
ctcctattctttcctccgtgggcctatgctttaccgtcatggattctgaagatacctatg
acatttatagaagtttctgtgtgggtattcattacttactacgttatcggatatgatccg
aatgttgaaaggttctttagacagtacctcctccttgttctcattaaccagatggcttcc
tcattatttcggttcattgcatcagccgctagaaacatgattgtagccaacacttttggg
acattcgctctacttgtactttttgcattaagtggctttatcctggcacgagacaaaata
aggggttggtggatatggggttactggatttcgcctttgatgtatgggcaaaatgcgctg
atggttaatgagttccttgggcaccagtggagtcgagttcctccgggctcaaacgaatcg
ataggacttcaagttttaaagtctagaagtttcttccatgaatcgtattggtattggctc
ggagtaggggcgttggctatatttgtagtattgctcaacgttttctttactctggctctt
acctttctaaagccctttgagaagaatcgagctgtaatatctgaaaaacccgaaagcaat
gatcaagccaatggtgttgttggaagcattcagttaacagaccgtgaaaaaagctcaagt
catgtaaatagatctgagatccaagatgacattcaaagaagcgcctcctcatccaagtcc
ttttctttgtctgacgcaactcttaggaccaatggcaaaaagaaaaagggaatggttctt
ccatttgagccgcattctctcacttttgaagacatttactattctgttgatatgccacag
gaaatgaaagaacaaggtatcactgaagatgatagattggtgctattgaagggtattagt
ggtgcattcagacctggtgttctcacagctctaatgggtgttagtggtgctggtaaaacc
actctaatggatgtgcttgctggcagaaaaactggtggttatatcgaggggaacattaca
gtttcaggtttccccaagcagcaagaaacttttgctcgagtatctggatactgtgaacaa
aatgacattcattctcctcatgtcaccgtgtatgaatctttgctttattccgcttggcta
cgattatccaatgacattgatgctgaaaccagaaagatgttcatagaagaagtcatggag
cttgtggaactggattcgttaaggcatgccctagttggtttacccggtgtaaacggttta
tcaacagagcagcgaaagaggcttacgattgcagttgagcttgtggcaaacccttctatc
attttcatggatgagccaacttcagggcttgatgcaagggctgctgcaattgttatgaga
acagttaggaatacagtggacactggaagaacagttgtgtgtaccatccatcaaccaagt
attgacatatttgaagcgtttgacgagctattccttatgaaacgtggaggacaggagatc
tatgtggggccactaggacaccattctaaatatcttatcagatactttgagggaattcaa
ggtgttagcaaaatcaaagatggatacaatcccgcaacttggatgttggaagttaccgca
tcagcgcaagagttatctttaggtgttgattttgctgatatctacaaaaactcagaccta
tacaggagaaacaaagctcttattgaagatttaagcaaacctgctcccggtgccaaggaa
ctttatttcccaacacagtattctcaatcattcttgacgcagtgcacagcttgtttatgg
aagcaacactggtcatattggcgcaacccaccgtatactgccgtaagatttctctttaca
accgtcatagcattgatgtttgggacgctgttctgggaccttgggtcaaaaacgaaaaaa
atacaagatctgtccaatgcaatgggttcaatgtatgctgctgttcttttcatcggtatc
cagaactcttcatctgtgcagcctgttgtgtcagtcgaaagaacagtcttttatagagaa
agagctgctggaatgtattctgccatgccatatgccattgcacaggtcttagtagagata
ccttatatttttgttcaagcttctgtgtatggcattatagtgtattctatgattggattc
gaatggaccgctactaagttcttttggtatctcttcttcatgctcttcaccttactttac
ttcacctactatggcatgatggctgttgctgtcacaccaaaccaccacattgcagccata
gtatcctcagcattctatggactatggaatgtcttctcgggtttcatcatcccacgacct
agtataccagtatggtggagatggtactattggatttgtccagtatcttggaccttgtat
ggattgtttgtttcacaatttggagatataaacgaactgcttgaagatggcaacaatgag
acggtgaagcagtacttgagaaataattatggtttcaggcatgattacctgggattagtt
gctgctgtgattatgagtttcgcagttctctttggaacaatctttgctgtggccataaag
atgttcaatttccagagacgatag
DBGET
integrated database retrieval system
