Gossypium arboreum (tree cotton): 108453830
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Entry
108453830 CDS
T05776
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108453830
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108453830
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108453830
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108453830
Prenyltransferases [BR:
gab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108453830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Zein-binding
Motif
Other DBs
NCBI-GeneID:
108453830
NCBI-ProteinID:
NP_001316940
UniProt:
O04838
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All DBs
Position
5:15350184..15355209
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AA seq
342 aa
AA seq
DB search
MADLRSAFLNVYSQLKSELLQDPSFELTDESRQWVERMLDYNVPGGKLNRGLSVIDSYRL
LKDGKELTQDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN
DGVILRNHITRILKNHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSL
QQHRRIVQYKTAYYSFYLPVACALVMCGENLDNHIDVKNILVDMGIYFQVQDDYLDCFGN
PETIGKIGTDIENFKCSWLVVKALEFCNEEHNKVLYENYGETRPANVAKVKALYNELNLK
GVFEDYESKSYERLVTSIEAHPSKPVQAVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcaggtcagcatttctcaatgtgtattcccagctcaaatcggagctcctt
caggatccttctttcgagttaaccgatgaatctcgtcaatgggttgaacggatgctggac
tacaatgtgcctggagggaaactgaatcgtggactctctgtgattgatagctaccgcctg
ttgaaagatggaaaggaattgacccaagatgagatttttcttacaagtgcgctcggttgg
tgtattgaatggcttcaggcatattttcttgttcttgatgacatcatggacagctctcac
acccggcgtggccagccttgttggtttagattgccgaaggttggtatgattgctgtaaat
gacggtgttatacttcgcaatcacatcaccaggattctcaaaaatcactttcgtgggaaa
ccttactatgtggatctgctagatttatttaatgaggttgagtttcaaacagcttcagga
cagatgatagacttgattaccacacttgaaggagaaaaggatctatccaaatactcattg
caacagcaccgtcgcattgttcagtacaagactgcctattattcattttatcttcctgtt
gcgtgtgcactggttatgtgtggtgaaaatcttgacaaccacatcgatgttaagaacatt
cttgttgacatgggaatctactttcaagtacaggatgactatttggattgctttggcaat
cctgagaccattggtaagattggaactgatattgaaaattttaagtgctcttggttggtg
gttaaagctttggaattctgtaatgaggagcataataaagtgttatatgagaattatggg
gaaaccagacctgccaatgttgctaaagtgaaggctctatacaatgagcttaatctcaag
ggcgtatttgaggactacgaaagcaagagctatgagaggctcgtaacctcaattgaagct
catcctagcaaaccagtgcaagcagtgttgaagtcattcttagggaagatctacaagagg
cagaaatag
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