Gossypium arboreum (tree cotton): 108454006
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Entry
108454006 CDS
T05776
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108454006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108454006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108454006
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
108454006
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108454006
Exosomal proteins of colorectal cancer cells
108454006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Rrn6_beta-prop
Serglycin
Motif
Other DBs
NCBI-GeneID:
108454006
NCBI-ProteinID:
XP_017607773
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All DBs
Position
9:complement(89206186..89211235)
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AA seq
456 aa
AA seq
DB search
MSNFFSKAEVTSSGRPVLPRNEVECHLLSAVDLEPEDHRHFSLLKSGLLILTTHRLIWLP
SSSASTPTSASAIPLAAISHIFSSKKSLKSVFHSPRIRFQVLVSSDGRVFDPGSGSGSSS
GSGSRSVVVTAVIRGKGDCDGFLVKFWDSWRARAWETTEISGSGSASASGSGAATGTGGG
LYSSDGSVRMVGVAGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLL
FGTSSQTSGTNDEDMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVRIPLE
RAGGMINLIDAYCLFNRARGTELISPDDMLQACSLWEKFDVPVMLRKFDSGVMVIQNKSH
SDEEVFARIKSLVTKPEALRTGISPTDAAMTLGIAPAMAKEHLLTAESKGLLCRDISPDG
FRFYINLFPEIDPCNMYFVKDYGICSTWIKAVSTTG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactttttctccaaggcggaggtgacaagcagcggccgccctgtcctcccccgc
aacgaagtcgaatgccaccttctctccgccgtcgacctcgaacctgaagaccaccgtcac
ttctcgctcttaaaatcgggtctcctcatcctcaccacccaccgcctcatctggctacct
tcttcttccgcctccacccctacttccgcctcagccatccctcttgctgccatttcccac
atcttctcttccaaaaaatctctcaagtccgtcttccactcccctaggatccgcttccaa
gtcctcgtctcgtccgatggtcgggtcttcgatccaggttccgggtctggttccagttca
ggttcgggctcgagatcagtcgtagtaacggcagtgattagagggaagggggactgtgat
gggtttttggtgaagttttgggacagttggcgggcgagagcttgggagactactgagatt
tcaggttccggctcagcttcggcttcgggttcaggggcagccacaggaaccggtggaggg
ttgtactcgagtgatgggtcggtgaggatggttggggtggcgggtattttaaggaaggag
caagaaatgtgggagagtactgataagagtttgcaggatgcttttcaggacttaaatgct
ctcatgagtaaagctaaagagatggtgatgctagcagaaaaaatgagacaaaagcttttg
ttcggaacgagttctcaaacaagtggaacaaatgatgaggatatgggttcaaaggaagag
atgcaagattggttgttgagtgttggcataatatccccagtcactaaagagtctgcaggt
gccctgtaccatcaacaattgtcccgtcagctggcagattttgtgagaattccactggag
agagcaggtggaatgatcaaccttatagatgcctattgtctcttcaatcgtgctcgtggc
acagaattgatctctccagatgatatgttgcaagcgtgttctttgtgggagaaatttgat
gttccagtgatgcttaggaagtttgatagcggagttatggtgatccaaaacaagtcccac
agtgatgaggaggtttttgctagaatcaaaagccttgtgactaagcctgaagcgcttcga
actggcataagtccaactgatgctgcaatgacattagggattgctccagccatggccaag
gagcatcttctaactgcagagagcaaaggtttgctatgcagggatataagccccgatggc
tttcggttttatattaacctgtttcctgaaatcgacccatgtaatatgtattttgtgaag
gattatgggatctgcagtacttggatcaaagcagtttctactaccggttga
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