Gossypium arboreum (tree cotton): 108454078
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Entry
108454078 CDS
T05776
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108454078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108454078
03016 Transfer RNA biogenesis [BR:
gab03016
]
108454078
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
108454078
Messenger RNA biogenesis [BR:
gab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
108454078
Transfer RNA biogenesis [BR:
gab03016
]
Prokaryotic type
tRNA degradation factors
108454078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
Urease_gamma
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
108454078
NCBI-ProteinID:
XP_017607879
LinkDB
All DBs
Position
9:9657812..9666502
Genome browser
AA seq
980 aa
AA seq
DB search
MAMFSLAIRARAKANPLLTRRALHFRNFCNGRFGLSTSESNPPDRPVAGTKFLESFKEEF
EIGSRVISLETGKIARFANGAVVLGMEETKVLSTVAAAKGDAVRDFLPLTVDYQEKQFAQ
GLIPNTFMRREGAPKERELLCGRLIDRPIRPLFSAGFYHEIQVMASVLSSDGKQDPDVLA
ANATSAALMLSDIPWGGPIGVVRIGRICGQFIVNPTMDELSLSDLNLVYACTRDKTLMID
VQAREITEKDLEAGLRLAHLEAVKYLEPQIRLAAKAGKQKKEYKLSMVSEQIFEKVKKLA
EAPIDAVFTDPSYGKFERGEALEKITQDVKSALEEECDEQSLKVLPKVVDTVRKKVVRKR
IISDGFRLDGRHLDEVRPIYCEAGHLPILHGSALFNRGDTQVLCTVTLGAPQDAQRLDSL
VGPPTKRFMLHYSFPPFCIDEIGKRAGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRIN
SEVMASDGSTSMATVCGGSMALMDAGIPLREHVAGVSVGLVTDVDPESGEITEYRILTDI
LGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIICESLEPARKGRLQILDHMEQEI
SVPRNQDDRNSPRLVTLKFSNDAIRRFIGPLGALKRKIEEETGARISVGDGTITIAAKNQ
AVMEKVQDKVDFIVGREIVVGGIYKGIVMSIKEYGAFVEFNGGQQGLLHISELSHEPVSR
VSDVVSVGQQISLMCIGQDVRGNIKLSRKATLPRPESETKSVVEGSAPVTKEKPNIWASP
ENMSKGEQLESTLEELVPSKMENTESNRSASLMPSVVIRSAAECDEEEKSAGLSKTSKSA
PKPKGTLKKGSKQKKIQSSDNMPDLSLSIMLSESLSRMGGNQEFTSQDEDEANLSDQNDK
ETGGNTPVTPQKLKLGTKVTAKIYQIRARGLVLDLGGGIRGMYKFESNGEREFTVGDELL
VQCSSFTSKGIPVVSMVDEE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttctcactagctatcagagctcgagccaaagctaatcctctcctaacacgg
agagccttacattttcgcaacttttgcaacggccgttttggtttatcgacgtcggagtcc
aacccacctgaccggccagtggcggggaccaagtttctcgagtctttcaaagaagagttc
gaaattggatctcgggtaatttcgcttgaaacgggtaaaattgctcgttttgctaatggg
gccgttgttttgggcatggaagagaccaaagttttgtccactgttgctgccgctaaaggc
gacgctgttcgagactttctaccgcttactgttgattatcaagagaagcaatttgctcaa
ggtctgattccaaacacattcatgcggagggagggtgctccaaaagaacgtgaactttta
tgtggtcgtctcattgataggcccatacggcctcttttttccgctggcttttaccatgag
atccaggtaatggcaagtgttctttcttctgatggcaaacaagatccagatgtgttggca
gctaatgcgacttctgctgctcttatgttatcagatattccatggggtggacccattgga
gtggtacggatagggagaatttgcgggcagtttattgttaatccaacaatggatgagctt
agtttaagtgatctcaacttggtatatgcatgtacgagggacaaaaccttgatgattgat
gtgcaagctcgcgaaatcactgagaaagatttagaagctggtttaaggctggctcatctg
gaagcagttaaatatctggaacctcaaatcagactggctgcaaaagctggcaaacaaaag
aaggaatacaaattatcgatggtctcagaacaaatctttgagaaagttaaaaagctggcg
gaagcaccaattgatgctgtttttacagatccttcctatggaaagtttgaacgtggcgag
gctttagagaagataacacaagatgtaaaaagtgcacttgaagaagaatgcgatgagcaa
agcttaaaagttctgccaaaggttgtggacactgtcaggaaaaaggttgtccgcaaaaga
attatttctgatggatttagacttgatggaagacatcttgatgaagttcggccaatatac
tgtgaggctggccatttgcctatattacatggatctgctctttttaaccgcggggatact
caggttctttgtaccgtgacacttggagcacctcaggatgcccaacgcttggactccttg
gttggtcccccaacgaagcgcttcatgcttcactatagttttccaccgttttgtatcgat
gaaattggtaaacgagctggcttgaacagacgtgaagtagggcatggaactcttgcggag
aaagctcttcttgctgtattgcctcctgaagatgattttccatacactgttcgaattaat
tctgaagtcatggcttcagatggttcaacatctatggctactgtttgtggaggcagtatg
gctttgatggatgctggcattccattacgagaacatgttgcaggtgtttcggtcggtctt
gttactgatgttgacccagaaagtggtgaaattacggagtatcgtatattgactgatatt
ttgggtcttgaagatcatctgggagacatggatttcaagattgctgggacaaggaatgga
gttacagcaattcaattggatataaaacctgctgggattcctttagatataatatgcgag
tctttggagcctgcacgtaaaggacgccttcaaatccttgatcacatggaacaagagatt
agcgtgcctcgaaatcaagatgatagaaattctcctcgtctagtaactttgaagtttagc
aatgatgctattcggcgatttattgggcctttaggtgctctcaaaagaaaaattgaagag
gaaactggtgctcggatctctgttggtgatgggacaattactatagctgctaaaaatcag
gctgtgatggaaaaagtgcaagataaggttgatttcatcgttggccgtgaaatcgtagtt
ggaggaatctataaaggtattgtgatgtcaattaaagaatatggtgcctttgtggagttt
aatggtggacagcaaggtctgctacacatttctgagctatcacatgaaccggtgtctcgt
gtttcagacgtggtgtctgttggccagcaaatttctttgatgtgcataggacaagatgtt
cgtggtaatataaaattatctcgtaaagcaactttaccccggcctgaatccgagacaaaa
agtgtagttgaaggatctgctcctgttactaaagaaaaacctaatatttgggcatcacct
gagaacatgtcaaaaggtgaacagctggagtccactctcgaggagctggtgccgagtaaa
atggagaatactgaatcaaaccgatccgcctctttaatgccatcagtagtaattcgaagt
gctgccgagtgtgacgaggaggagaagtctgctggtttgagtaagacttccaaaagtgct
cctaaaccaaagggcacgttgaaaaagggtagtaaacagaaaaagatccagtcttctgat
aacatgcctgatttgtctctcagtattatgttatcggaatccttatcccgaatgggaggg
aatcaagaatttacttctcaagatgaagatgaggctaatctgagtgatcagaatgacaag
gaaactggtggtaacactccagtgacacctcaaaaactgaagctaggaacaaaagttact
gccaagatttatcaaattcgagcacgtggtttagttctcgatttgggtggtggaattcgt
ggcatgtacaagtttgagtccaatggtgagagggagtttactgtaggtgacgaattgcta
gtccaatgttcaagttttacaagtaaaggtatcccggtcgtgtctatggtggatgaagaa
tga
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