Gossypium arboreum (tree cotton): 108454084
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Entry
108454084 CDS
T05776
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X2
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108454084
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108454084
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
F-box_5
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
108454084
NCBI-ProteinID:
XP_017607888
UniProt:
A0ABR0NUV2
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Position
9:87930349..87934347
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AA seq
607 aa
AA seq
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MRGHDWINTCLPDELILEILRRLDSKSSHDACSLVCKRWLGLERLSRSILRIGASGSPDI
FIKFLAQRFVNVKAVHIDERLSISLPVTAGKRRRRDENSLLSLKIHFAGERNEPKEEECE
PFCLTDSGLTAVADGFAKLEKLSLIWCSNVTSFGVMSLAQKCSLLKSLDLQGCYVGDQGL
AVVGQCCKQLEDLNLRFCESLTDSGLVTLATECGKSLKSLGVAACARITDKSLEAVGSHC
KNLETLSLDSEFISNKGILAIAQGCPLLKVLKLQCINVTDRALMAVGASCLSLEMLALYS
FQQFTDEGLRSIGKGCKKLKNLTLSDCNFLGDRGLEAIATGCTELTHLEVNGCHNIGTIG
LESVGKSCPRLTELALLYCQRVGNFALTEVGRGCKYLQALHLVDCSSIGDEAICSIAKGC
RNLKKLHIRRCYEVGSKGIVAVGEHCHSLTDLSLRFCDRVRDEALIAVGQGCPLKYLNVS
GCNQIGDAGIVAVARGCPNLTYLDVSVLQNLRDIALTELGEGCPLLKDIVLSHCHQITDI
GLSHLVKNCQMLESCHMVYCPSITAAGVATVVSSCPNIKKVLVEKWKVSPRTKRRASSVL
SYLCVDL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggccatgattggatcaatacgtgtcttcccgacgagctgatcttggagatctta
cgccggcttgattccaaatccagccatgatgcctgttctctcgtctgtaaacgttggctc
ggtctcgagcggcttagccgttccatcctccgaatcggcgcctctggtagccctgatatt
tttatcaagttcctcgctcaacggttcgttaatgtcaaggctgttcatatcgacgagagg
ttatcgatttctttgcctgttaccgcggggaaaaggcgtcgcagagatgagaattcgctt
ttgtctttaaagatacattttgcgggtgaaagaaatgagcccaaagaagaggagtgcgaa
ccattctgtttgacagattccggtttgactgcagttgctgatggatttgctaagctagaa
aagttgagcttaatttggtgttctaatgttactagtttcggtgtaatgtcccttgcacag
aaatgctcgctcttaaaatcattggatttgcagggttgctatgttggagatcaaggtcta
gctgttgttggccagtgttgcaagcaactcgaggacctaaatttgcgtttttgtgaaagc
ttgactgattcaggattggtcactttggcaactgagtgtgggaaatcattgaaatctctc
ggtgtggctgcttgtgctagaataaccgacaaatcactggaggctgtggggtcccactgc
aaaaatcttgagaccttgtcattggattcagagtttatcagcaataaagggatcctggct
attgcccaaggatgtcctcttttgaaagtcttgaagttacaatgtattaatgttacagac
agggctttgatggctgtgggagcttcttgtttgtcattggaaatgttggctttatacagc
ttccagcaatttacagacgagggtcttcgttctattggcaaaggctgcaagaagctaaaa
aatcttactttgagtgattgcaatttcctgggtgacaggggtctggaagcgattgccact
ggctgcactgaacttacgcatcttgaagttaatggctgccacaatattggaaccattgga
ctggagtctgtcgggaaatcttgcccgcgcctgactgagttggctttattatactgccaa
agggttggcaattttgctcttactgaagttggaaggggctgtaaatacttgcaagctctt
cacttggtagactgctctagcattggtgatgaagctatttgcagtatagccaaaggttgc
cgaaatctaaagaagcttcatatcaggagatgttatgaggttggaagcaagggaatcgta
gctgttggtgagcattgtcactctctcacggatcttagtctccgcttttgtgatagggtg
cgcgatgaggctcttattgctgttggccagggatgtccattaaaatatctaaatgttagt
ggctgcaaccaaataggtgatgccggaattgtagccgttgcaagaggatgtcctaatctc
acttaccttgatgtcagtgttctccagaatttgcgcgatatagcactaaccgagttagga
gaaggttgccccttactcaaggatatagtactgtcccattgccaccaaataactgacatt
ggtctttcccacctcgtcaaaaactgccaaatgctcgagtcatgccacatggtgtactgt
ccgagcataaccgcggcaggagttgccaccgtggtctctagttgtcccaacataaagaag
gtcctggttgagaaatggaaggttagtcccagaaccaaaagaagagccagttcagtcctt
tcttatctctgtgtagacctctaa
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