Gossypium arboreum (tree cotton): 108454095
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Entry
108454095 CDS
T05776
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
gab03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108454095
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108454095
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108454095
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108454095
03036 Chromosome and associated proteins [BR:
gab03036
]
108454095
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108454095
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108454095
SWI/SNF complex
108454095
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108454095
PBAF complex
108454095
SWI/SNF complex
108454095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
108454095
NCBI-ProteinID:
XP_017607903
LinkDB
All DBs
Position
9:77514491..77520822
Genome browser
AA seq
347 aa
AA seq
DB search
MKSPASASWKAPLKFRMPTAENLIPIRLDIEVDGQPYKDAFTWNPYDPDSEVVMFAKRTV
KDLKLAPGFLPQIVQSIQSQLATFQSYEGQDMYVGDQIIPIKLDLQVNHTVIRDQFLWDL
NNFDSDPEEFARTLCKDLGIEDPEVEPAIAFAIREQLYEIAIQNVTTARENRISKKGRRA
AEHFTPSKASGAALDLTKLFSFRSSVVWKRKDWDYYKPVLDLLSNEDVDALKAKEERSGW
LDIEVDGQRYKDAFTWKPYDPDSEVVMFAKKDCKRLEACQRTTILYINLLLYPLPLLGSV
GSSFTLSDRSRFLSLYMSPIFEICGFIFYMVSAAFVCCCWFFLFNHE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgccggcgtcagcttcatggaaagcccctctaaagttcaggatgccgacagct
gaaaatttaatacccattaggcttgacatagaagtcgatggacagccctataaagatgct
ttcacttggaacccttatgatccggattcagaggtggtgatgtttgcaaaaaggactgta
aaagacttgaagcttgcccctggtttccttccgcaaattgttcaatccattcagtcacag
cttgccacctttcaatcatatgaaggtcaagacatgtacgttggtgaccagatcattcca
attaagcttgatcttcaagtcaatcatacagttatcagggaccagtttttatgggacttg
aacaactttgatagtgatcctgaagaatttgctagaactctctgcaaagatttaggcatt
gaagaccctgaagttgagcctgcaattgcctttgcaattagggagcaactttatgagatt
gcaattcaaaatgtaactacagcaagggagaacagaataagcaaaaagggtcgtcgggct
gctgaacatttcactcccagtaaagctagtggtgctgcactggacttgacgaagttattc
agtttcagatcaagtgttgtctggaaaagaaaggactgggattattataaacctgttctt
gaccttttatctaatgaggacgtggatgctctcaaagccaaagaagaaaggagtggctgg
cttgacatagaagtcgatggacagcgctataaagatgctttcacttggaagccttatgat
ccggattcagaggtggtgatgtttgcaaaaaaggactgtaaaagactcgaagcttgccaa
agaacaactatcctatacatcaacctccttttgtatcctctgcctttgttgggctctgtt
ggttcttccttcactttatctgatcgttcgaggttcctttctctctatatgtctccaatt
ttcgagatctgtggatttattttctatatggtttccgcggcatttgtctgttgttgctgg
ttttttttattcaaccatgaatag
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