Gossypium arboreum (tree cotton): 108454120
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Entry
108454120 CDS
T05776
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108454120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108454120
Transporters [BR:
gab02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
108454120
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GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
108454120
NCBI-ProteinID:
XP_017607936
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Position
10:122266860..122272470
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AA seq
549 aa
AA seq
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MKNSVSDQSFYIESEDDEEVEKLEYDRNEEDEGNEEFYASFSSQRKNSSYATQWPQSYRQ
SIDLYSSVPSPTIGFLGTPTLSRLGSSFLSSSLTRRFTPESLNAPVKKPLLPPSVDDEIQ
PHKRTYSLATPAPSRKPSVRFDEKVQVDHGHGIPLGRQSSYGQAVVNGINVLCGVGILST
PYAAKEGGWLGLIILLTFAVLSFYTGLLLRQCLDSSPELETYPDIGQAAFGSTGRIALSI
ILYVELYASCVDYIILEGDNLSSLFPNAHINLGGFDLNSRRLFSLMTTLAVLPTVWLRDL
SVLSYISAGGVVASFLVVFCLFWVGLVDQVGFQNKGTVLNLSTLPVAVGLYGFCYSGHAV
FPNIYTSMAEPRKFSSVLLSCFGICSLLYAGTAVMGYKMFGEATESQFTLNMPKDLVASK
IAVWATIVNPFTKYALTLSPVAMSLEELLPPRHLKSHVYPMLIRTALVVSTLLVGLSVPF
FGLVLSLIGSLLTMLVTLILPPACYLSILRGKVGCIQATICIIIIAVGAVSSAFGTYSAL
TKIIQNLSS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactcggtttctgatcagagtttctacatcgagagcgaagacgatgaagaagtt
gagaaattagagtatgatagaaatgaagaagatgagggaaatgaagaattttatgcttct
ttttcttcccaaagaaaaaacagttcttatgccactcaatggcctcaaagttacaggcag
tctattgatttgtatagtagtgtaccatccccgaccatcggattcttgggcactcctaca
ctatcaagactaggaagttcgtttctttcatcatcgttaacccggagattcactccggaa
tcacttaatgcgccagtaaagaaaccgttgctaccaccatcagtagatgatgaaatacag
ccgcataaacgtacgtactctttggcaactccggcaccgtcgaggaaaccgtctgtaaga
tttgatgagaaagtacaggtcgaccatggtcacggaattccccttggtcgccagagttca
tatggtcaagctgtggtaaatgggattaatgtgctatgtggagttggaatcctttctacc
ccatatgctgccaaggaaggaggatggttagggctaataatattattaacatttgcagtg
ctttctttttacactggcctccttttgcgccagtgtctggatagctcacctgagcttgaa
acttaccctgatattggtcaagctgcatttggttccaccggtagaatcgccctttcaata
attttgtatgtggagttatacgcttcttgtgttgactatataattctagagggtgataac
ttgtcatccttattcccaaatgcacacattaatttgggcggattcgatttgaactcgcgt
cgtctcttctcgttgatgacaacccttgctgttcttcccactgtttggctcagagacctc
agtgtccttagttatatctctgctggtggagttgttgcatcattcttggtagtgttttgc
ttgttttgggttggattggtagatcaagttgggtttcagaacaaagggacagtattgaat
ctttctacacttccagttgctgttggactttatggtttctgctactcaggccatgctgtt
ttcccgaatatatatacttcaatggcagaaccaagaaaattctcttcagttctcttatca
tgtttcggaatctgttctttgttgtatgctggaacagcagttatggggtacaaaatgttt
ggagaagcaacagaatcacagtttacacttaacatgcctaaagacctggttgcttcaaag
attgctgtgtgggctacgattgtcaacccatttaccaaatatgcattaaccttgtctcca
gtggcaatgagtcttgaggaattattaccaccacgccatctcaagtctcacgtgtaccct
atgttaattagaacagcactggtggtctcaaccttgcttgtaggtctcagcgttcccttc
ttcggcttggtattgtcattgataggatctttactcacaatgcttgttaccttgatactt
cctcctgcttgttatttaagcatattgaggggtaaagtaggctgtatccaggctacaatc
tgtattataattattgcagtgggagcagtttcatcagcctttggaacatactcagcactc
accaagattattcagaatttgagtagctga
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