Gossypium arboreum (tree cotton): 108454199
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Entry
108454199 CDS
T05776
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108454199
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
108454199
Transfer RNA biogenesis [BR:
gab03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
108454199
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
PepSY_2
Motif
Other DBs
NCBI-GeneID:
108454199
NCBI-ProteinID:
XP_017608065
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Position
9:80036541..80041938
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AA seq
795 aa
AA seq
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MMAVRAVNGGSLFRTAASPPLLTFGCRFRQFSSLPFRRNSELGLRFPFFCCGNQFLGYGG
GLSRSVHSLVDCVMEELTAWRSRRRIRATVKLTTSGELLEDKLVNQEIEKGLLLEFKKDS
DRVLLGVAQRPDGKKNWMVYDQNGVTSSIKPQQITYIVPGVENFDHAEISKFLQKAQENL
DPTLLEIAWVELLEKNASVTAEELAEMIFGSSEPLESYCAHLLLSKDEVYFTVLATKGSR
TIYGPRPTGQVHVEELLHKKLAKDAAEKELQDFVQLIVSAKAKPALAKPPKSSWMVDEKI
QYKIESLEAYAIDACKSDEQRKTAGMILKAMGLTKTASSALNLLINIGYFPVHVNLDLLK
LNILTDHSDEIIAAAESLLSDSSDSDEMNREDLTHLKVYAIDVDEADELDDALSATKLQD
GRMKIWIHVADPTRYVEPGSMVDREALRRGTSVFLPTGTYPMFPEKLAMEGMSLKQGELC
NAVSVSVILHSDGSIAEYSVQNSIIKPTYMLTYESATELLHLNLEEEAELKILSEAAALR
LKWRRQQGAIDTSTLEARIKVVNPEDLEPSINLYVENQADPAMRLVSEMMILCGEVVATF
GSCNNIPLPYRGQPQSNIDVSAYSHLPEGPVRSSAIVRIMRAAEIDFRKPIRHGVLGLPG
YVQFTSPIRRYLDLLAHYQVKAFLKGETPPFSAGQLEGIASIVNMQVRVVRKLSASSLRY
WIIEFLRRQPREKKYRALILRFIKDRIAALFVVEVGLQASAWVSIGSQVGDEVEVQVEEA
HPRDDVLYLKEVLRN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttcgcgccgtcaacggtggttctttgtttcgtaccgccgcttcgcctcct
ctgttgacgtttggctgccggttccgccaattcagctccttaccgtttcgccgaaactct
gagttagggcttcgatttccttttttttgttgcgggaatcagtttctaggatatggcggt
ggcctttcgcgttcggttcatagtctcgttgattgcgtcatggaagagctaacagcttgg
cgcagtcgcagaagaattcgcgccactgtcaagctaacgactagtggtgagcttcttgaa
gataaacttgtcaatcaagaaatagaaaagggattgctgctggagtttaagaaggattca
gatagggtattgctcggagttgctcagaggcctgatggaaagaagaactggatggtgtac
gatcagaatggtgtcacatcatctatcaaaccacaacaaattacatatattgttccaggt
gtagaaaattttgatcatgctgagatctcaaaatttctccaaaaagctcaggaaaacttg
gacccaacattgcttgagattgcttgggttgagcttcttgaaaagaatgcgtcagtgaca
gcagaagaattggctgagatgatatttggtagttcagagcctcttgagagctattgtgcc
catcttttgctatcaaaagatgaagtatacttcactgtgctggcaacaaagggttctcgt
acgatttatgggcctcgaccaacaggacaagtacatgtggaagaacttttacacaagaag
cttgccaaggatgccgctgagaaagaacttcaggactttgtacaattaattgtctctgct
aaagcaaagcctgcacttgctaaacctcccaaatcttcctggatggtggatgagaaaatc
caatacaaaattgaatcccttgaagcatatgccattgatgcctgcaaaagtgatgagcaa
aggaaaactgctggaatgatcctgaaggcaatgggactaacaaaaacagcatcctctgca
ctaaaccttctcataaacattggttattttcctgtgcatgtcaatcttgatctgttaaag
ttaaacattcttacagatcattctgatgagattatagctgctgctgaaagtcttctgtct
gattcatctgactcagatgagatgaacagagaggatcttactcatttgaaggtttatgct
attgatgttgatgaggctgatgagcttgatgatgccttaagtgcaacaaagttgcaagat
ggccgtatgaaaatatggatacatgttgcagatccaactagatatgttgaacctgggagc
atggtagacagggaagcactgagaagaggaacctctgttttcttgccaactggcacttat
cctatgtttcctgagaaacttgctatggagggaatgagtttgaaacaaggagaactttgc
aatgcggtcagtgtctctgttatcctgcactctgatggcagcattgcagagtattcagtt
caaaactcgattattaaaccaacttatatgctgacctatgagagtgcaactgagctgctt
catttgaacctggaagaggaggctgaactgaagattctatctgaagcagctgctctaagg
ttaaagtggcgtcgccagcagggtgcaattgatacatccaccctagaagctcgcattaaa
gtagttaacccagaagaccttgaaccatcaatcaatctttatgttgaaaaccaagcagac
cctgcaatgcggcttgtttctgagatgatgatactttgtggagaagttgtagccacattt
ggatcttgcaataacatccctttaccctatagaggacagccacagtcaaatattgatgtt
tctgcatattcacatcttcctgaagggccagttcgaagctctgccattgttagaataatg
cgtgcagctgaaattgatttcaggaagcctattcgtcatggggttcttggacttcccggt
tatgttcagtttacatcacccatccgtagatatttagatctccttgctcactatcaggtg
aaggcatttcttaaaggtgaaactccacctttttcagctggtcagctagaagggattgca
tcaatagtaaatatgcaagttagagttgtaagaaagctctcagccagcagtctccggtat
tggataatagagtttctgagaaggcagccaagggaaaaaaaatatcgtgcattgatcctc
agattcatcaaggacaggattgcagccttatttgtagttgaggtgggacttcaggcatct
gcatgggtgtctataggatctcaggtaggagatgaagtagaagttcaagttgaagaagcg
catcctcgcgatgatgttctttaccttaaggaggttcttagaaactga
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