Gossypium arboreum (tree cotton): 108454234
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Entry
108454234 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108454234
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108454234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108454234
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108454234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Utp12
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_HPS5
WD40_Gbeta
PQQ_2
Beta-prop_WDR19_1st
Rpn13_ADRM1_Pru
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
108454234
NCBI-ProteinID:
XP_017608112
UniProt:
A0ABR0NRM1
A0A0B0NW05
LinkDB
All DBs
Position
9:60466593..60472880
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AA seq
616 aa
AA seq
DB search
MGSLNIRDVLTAFSPSLDYFAISSGDGRIKIWDTLKGQIQTEFADIISSEATNIYAKAER
GHLSIDYKCMKWLSFDKKKKRKLGSALLILGTGSGDVLALDVSAGQLKWKVSDCHPGGVS
AIAFATNGSCIYSSGADGMICKIDSLTGNLLGKFRASTKSISCMAVSCDGKTLVTAAGQL
KSFDCSNHKKIQKFTGHPGSVRCMIFTEDGKFILSSAAAERYIAVWRTDGGKKQSASCVL
AMEHPAVFVDSKCVNGDIYVLAISETGVCYFWYGQDVEALCNAKPTKLSISLGDGLSKSH
KGALPMIFAAKLQGVAKQASVHAFLAHGLLVKPLFQKMVVQYGADMLLSSSQDGVLLPRS
QSLNKSKKGLDSQNRVIALDRANAEDASLPIPKIFYLLEEREDRHRSLSVGTDNVMTDSI
DHGSQQKFVDGKDASIKLEADSKALCMEDQLRSLGILDTCNSDSIVFDGINLEANLPPKK
MRAAISSMEPGDAHKLLEDLVKLWQSRSSSGNYVLPWIYSLLLTHGHLMSQESETQMLNS
LLKNTKSRGLALQPLLQLSGRLQLVTTQIDKAAQNRSQHSTSDHKMDESEDDDDDDVDDV
LYGEEDESQISSDDDN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgggatccttgaatattagagatgtcttgacagcatttagtccttctttggactatttt
gctattagttctggagatggtcgtattaagatttgggacactttgaagggtcaaattcaa
actgaatttgcagacattatatcaagtgaggcaacaaacatatatgctaaggcagaaaga
gggcatctttcaattgattacaaatgtatgaaatggttgtcttttgacaaaaagaagaaa
aggaaacttggaagtgctttgctcatattgggaacaggaagtggtgatgtcttagcactc
gatgtgtctgctggtcagctgaagtggaaagttagtgattgccatcctgggggtgtcagt
gccattgcatttgctacaaatggctcttgcatttatagttctggggctgatgggatgatt
tgcaaaatcgattcattgactggaaatctattagggaagttcagagcttctacaaagtca
atatcctgtatggctgtctcatgcgatggaaagacgttagtcacggcagctgggcagttg
aagtcttttgattgttctaatcacaaaaagatacagaagtttactggacatcctggatct
gttcggtgcatgatatttaccgaagatggaaaatttatcctatcatctgctgctgctgaa
agatatattgctgtatggagaacagatggaggcaaaaagcagtctgctagttgtgtttta
gcaatggagcaccctgctgtctttgtagatagcaaatgtgttaatggtgatatctatgtt
cttgcgatttcggaaactggtgtttgttatttttggtatggtcaggatgttgaggcactg
tgcaatgccaagcccacgaagctttcaatatctttgggagatggtttatctaaatctcac
aaaggtgcattacctatgatattcgctgcaaaattgcaaggcgttgccaagcaagcatct
gtgcatgcatttcttgcccatggtttgttggtaaagccattgtttcagaaaatggtcgtg
cagtatggtgcagacatgttattgagtagctctcaggatggagtccttttgccaaggagt
caatcccttaacaaatcaaagaaagggctcgattcacagaatagagtaattgcattggat
cgtgcaaatgctgaggatgcctcacttccaatcccaaagattttttatcttctcgaggaa
agagaggatagacatagaagtttgagtgttggtactgacaatgtgatgactgattccatt
gaccatgggagccaacaaaaatttgtggatggaaaagatgcttcaataaaattagaagcc
gattcaaaagcactttgcatggaggatcagttaagatcacttggaatacttgatacatgt
aactctgattctatcgtctttgatggtattaatcttgaagctaatttgccaccaaagaag
atgagagcagctatttcttctatggagcctggtgacgctcataagttgcttgaagacttg
gtgaaattgtggcaatcaaggtcaagtagtggaaattatgttcttccgtggatatatagt
ttattactgactcacggtcatcttatgtctcaagaatccgaaacccagatgcttaattcc
ttattgaagaataccaaatcgagaggattggcccttcagcctttgctacaattatctggg
cggttacagctagtaacaacacagattgacaaggcggctcagaacagaagtcaacactcc
acaagtgatcacaaaatggatgaaagtgaagatgatgatgatgacgatgtagatgatgtt
ctttatggggaagaagatgaatcccaaataagtagtgatgatgataattaa
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