Gossypium arboreum (tree cotton): 108454265
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Entry
108454265 CDS
T05776
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108454265
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108454265
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108454265
04121 Ubiquitin system [BR:
gab04121
]
108454265
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108454265
Peptidases and inhibitors [BR:
gab01002
]
Metallo peptidases
Family M67
108454265
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Others
Others
108454265
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108454265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
TSP_NTD
Motif
Other DBs
NCBI-GeneID:
108454265
NCBI-ProteinID:
XP_017608159
UniProt:
A0A0B0NE95
LinkDB
All DBs
Position
11:complement(429422..435441)
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AA seq
504 aa
AA seq
DB search
MMSSTERINIAASAQRLDVDNRIPLRYYYRIADNILKQADIFRAEKNIIDLYIMLLRFSG
LVSETIPFHRDYRASLQSQKVYLKNRLLNALNELEELKPAVQQKINELNRRYTNQSNSLQ
QSAVKNQSLTYYGMTKAVKPAAREFNSYGPIAQQLSYSKPMEEQFRRMSLNLMRPKDETL
SKHSILGPNGLYGQWQPPKTNIRVQYPSNIDLTPIEFPSLQQAIENKLPDKSDHSNSEPE
ASSIESTVTVGNCENSQKSHVDEPCPMISFEESETAPVHINVTRQPSPPPVLAEVQDLVH
AISPQVKETDCRIDNPSTEALVPSESPLQLHISTTMMESFMKLAKSNTNRNLETCGVLAG
SLKNRKFYVTALIIPKQDSTSDSCQTTNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSI
DLHTHYSYQIMLPESVAIVMAPRDASRKHGIFRLTTPGGMSVIRQCQKRGFHPHIQPPDG
GPLYSTCTDVYMNPNLNFDVIDLR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctcgacggaaagaataaacatagcggcgagtgcgcaaagacttgatgttgat
aatcggatccccctccgctattactaccggattgccgacaatattctcaaacaggctgac
atctttcgagctgagaagaacatcatagatctatacatcatgcttctaaggttttcaggt
ttggtttctgaaacaataccattccatcgagattatagagcatcactacaaagccaaaag
gtctacttgaaaaatagactactcaatgccttgaatgagctagaagaattgaagccagca
gtgcagcagaagatcaatgaattaaacagaagatatactaatcaaagtaattcgttacag
caatctgctgttaaaaaccagagtttaacatactatggtatgacaaaggcagttaaacca
gctgcgcgagaatttaattcttatggtccaatagctcagcaattatcatattctaaacca
atggaagagcagttcaggaggatgtcattaaacctgatgcgtccaaaggacgaaaccctc
tccaaacattctattctgggtccaaatgggctttatgggcagtggcagcctcctaaaact
aatatacgggtgcaatatccaagcaatattgacctgactccaattgaatttccaagtttg
cagcaggctatagaaaataaacttccagacaaaagtgatcatagcaactcagaacctgaa
gcatcaagcatagaatcaactgttactgttggcaattgtgagaatagtcagaagtctcat
gtggatgaaccttgtccaatgatttcttttgaagaatcagaaacagctccggttcatata
aatgttaccagacagccatctcctcctcctgtacttgcagaagtacaggatttggttcat
gcaatatctccccaggtgaaggagacagattgtagaatagataacccctcaacggaagct
cttgttccttctgaatctcctctacagttgcacatttcaacaacaatgatggaaagcttc
atgaagctggctaaatcaaatacaaataggaatttagaaacttgtggtgttcttgcaggt
tcacttaaaaataggaagttctatgttacagcacttattatcccaaagcaggattcaaca
tctgactcatgccaaacaacaaatgaggaggaaatatttgaagtacaggataagagatct
ctctttccactgggttggattcatacacatcctacgcaatcatgtttcatgtcatcaatt
gatctccatactcactactcataccagattatgttgccggaatctgtagcaatcgtaatg
gcaccaagagatgcttcgagaaaacatggaatttttcgtttgactactccgggtgggatg
tccgtcattagacagtgccagaaacgtggcttccatccacacattcaacctccagatggt
ggccccctttacagtacatgtacagatgtgtatatgaatccgaatctgaactttgacgtc
atcgatcttcgatga
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