Gossypium arboreum (tree cotton): 108454421
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Entry
108454421 CDS
T05776
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108454421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108454421
03036 Chromosome and associated proteins [BR:
gab03036
]
108454421
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108454421
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108454421
PBAF complex
108454421
GBAF(ncBAF) complex
108454421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
108454421
NCBI-ProteinID:
XP_017608366
UniProt:
A0A0B0MFQ5
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All DBs
Position
9:16929515..16932657
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AA seq
527 aa
AA seq
DB search
MSVNNNNPPKSIGASSSPFGNASQAQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAH
AQFQAHLQAQGLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTM
SPLRTMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQ
EALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFV
QKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFDVKRKGDKEFTVNI
RLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFNCDAQLM
KVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDL
SALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLK
LASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPGST
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaataacaataaccctcccaagagcattggggcgtcttcgtcgccctttggt
aatgcttcacaagcacaaacacaagcacaactcagtgctggttttcaaaatcagtatcag
ctatcccaagctcaggcccttgctcatgctcaagctcaagctcaagcgcagttagctcat
gcccaattccaagcacacttacaagctcaaggtttgtcccttaaccaagctcaaaatgcc
ggcattgggaacttaggtacgtcttcgccatccatgtcgactcctggcagtgcaagtgcc
aagaggatccttcaaaggccccctatgcgtcctcctggtgttcctgtgacaaatacaatg
tctcctttgagaacaatggatcttacgaccgctgcacgtaaaaagaagcagaagcttccc
gagaaacagctgcaggatagagtggcggcaattcttcctgaatctgctctgtatacccag
cttcttgagtttgaggcacgtgtcgatgctgccttaactcggaaaaaagttgacatccaa
gaagcccttaagaatccaccttgtgttcaaaagacacttcgaatatatgttttcaacacg
tttgctaatcagatgcaaacaattccaaagaagcctaatgcagagccccctacatggacc
cttaagataataggaagaatcttggaagatggggtagatccagatcaacctgcatttgtt
caaaaaacaaaccccttataccctaagttttcatctttcttcaagagagtgacaatttcc
ttggatcagagactatatccggaaaatcatatcattatatgggagcaggctcgatcgcct
gctcctcatgaaggttttgacgtaaagagaaaaggggataaggaattcaccgtgaacatt
aggttggaaatgaattatgcgccagagaaattcaagctttcttcagctttagtggaagtc
cttggtattgaggttgatacacgccccagaattatagctgcaatttggcattatgtgaag
gctagaaaacttcagaacccaaatgatccatcttgctttaattgtgatgcacaacttatg
aaagtttttggggaagaaaaagtgaaatttaccatggtttcgcagaagatatcgcagcat
ttgtcttcaccacctcctatacatttggagcataagatcaagctttccgggaacaatcct
gctgggtctgcatgctatgatgtgttagttgatgtgccattgcctatacagagggatttg
tctgctctgttagcaaatgcagagaagagcaaagagattgaacagtgcgacgaagcaata
tgtgctgccataaggaaaattcatgagcaccgtagaagacgtgcattctttctagggttc
agccaatcacctgtggaatttatcaatgctttaatcgagtctcagagccgggatcttaaa
ttggcatctggggaagctagtcgaagttctgaaagagagcgacgatcagatttcttcaac
caaccatgggttgaagatgccgttatccgttatctgaatcgcaagccaggtgctggtgga
agtgatgcaccaggaagcacatga
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integrated database retrieval system
