Gossypium arboreum (tree cotton): 108454608
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Entry
108454608 CDS
T05776
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108454608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108454608
03036 Chromosome and associated proteins [BR:
gab03036
]
108454608
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
108454608
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
108454608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
RMC1_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Ge1_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_1st
WDR54
CFAP43_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
108454608
NCBI-ProteinID:
XP_017608611
LinkDB
All DBs
Position
11:complement(1169443..1171745)
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGCLSSFSNLKGQSRCPLQEQLLQRKNSKENMDRFIPNRSAMDFDYAHYMLTDGRKIK
ENQTACSPAREAYRKQLAETLNMNRTRILAFKNKPPAPVELFPSEHSTASAHPTKSLKPR
RHIPQSSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGNTVYLWDASDSSTSELVTVDDE
NGPVTSVNWAPDGRHIAIGLNNSEVQLWDSTANRQLRTLRGCHRSRVGSMAWNNHILTTG
GMDGQIVNNDVRIRSHVVETYRGHQQEVCGLKWSASGQQLASGGNDNVVHIWDRSMASSS
SPTQWLHRLEEHTSAVKALAWCPFQSNLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV
CSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELMGHTSRVLYMAQSPDGCTVASAA
GDETLRFWNVFGVPEVAKTAPKVNREPFSQLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatgtttaagttcattttcaaacttgaagggtcaatctagatgcccgctt
caagaacaacttctccagagaaagaattccaaggaaaatatggatagattcataccaaac
cgttcagcaatggactttgattatgcgcattacatgctgaccgacggaaggaagatcaaa
gagaaccaaacagcatgctcacctgccagggaggcctacaggaagcagctggctgagacc
ttgaacatgaaccgcacccgaatcttggctttcaagaacaagccaccagcacccgtcgaa
ctcttcccttccgagcactcaacggcttcagctcatccgaccaaatccttaaagcctaga
agacatattccccagagctctgagagaacattggatgctcctgatctcgtcgacgatttt
tacttgaatttattggattggggcagcagtaatgtactagcaatagcactcggaaacacc
gtgtatctgtgggatgcttcagatagttctacttcagaacttgtcactgttgatgacgaa
aacggaccagtaacaagtgtgaattgggctcctgatggtcggcatattgccattggcttg
aacaattccgaagtacaactatgggattcgactgccaaccggcagctgcgtactctgaga
ggttgtcacagatcaagagtgggttcaatggcatggaacaatcacattctcacaacagga
ggaatggatggtcagattgttaacaacgatgtgagaattagatcccatgttgtcgaaact
tacagaggccaccagcaagaggtttgcgggctgaaatggtcggcttccgggcaacagcta
gccagcggaggcaatgataatgttgttcacatatgggataggtccatggcatcttcaagt
tcaccaactcaatggctacacaggttggaggagcatacctcagctgtcaaagcccttgcc
tggtgccctttccagagcaatttgctggccacaggtggaggtggcggcgatcgaaccata
aaattttggaacacacatactggtgcatgcttgaattcagttgataccggctcccaggtt
tgctcattgctatggagcaagaatgagagggagctattgagttcccatgggtttactcag
aatcaattaactctttggaaatatccatcgatggtgaagatggcagaactaatgggtcat
acatctagagtactttacatggctcaaagccctgatgggtgcacagtggcatcagcagca
ggggatgagactctaagattctggaatgtttttggggtcccagaagtggctaaaactgct
ccgaaagtgaaccgtgagccattctctcagttgaaccgtatccggtga
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