Gossypium arboreum (tree cotton): 108454647
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Entry
108454647 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108454647
03036 Chromosome and associated proteins [BR:
gab03036
]
108454647
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108454647
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108454647
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108454647
microRNA pathway
RISC loading complex
108454647
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
AvrD
MCM_WH_arc
Motif
Other DBs
NCBI-GeneID:
108454647
NCBI-ProteinID:
XP_017608666
LinkDB
All DBs
Position
9:67288993..67295497
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AA seq
960 aa
AA seq
DB search
MSGLDGGGRGSGRGGGGRGRGYGHPRCQPSQSSSRGGGGGGGRARGRGSSGSTVTYNPPP
PQMAPAQPPPQMAVAPLGVPFSHPSSSSGVGSLSREVSEKLTMEPVAVTTAPPLPPSSSK
AIMFPPRPGFGTVGTKCLVRANHFLVDVADADLHHYDVTITPKVTGKKVNRAIMKQLIDV
YKESHLGRRCPVYDGRKSLYTAGPLPFESKELVIKLTEEDCSDGSSRPAWKERQFKVAIK
LASKTDLHYLREFLSRRHFECPQEAIQVLNVVLRAKPSQIYTEVGRSFFHTSLGPRGDLG
NGIEYWSGYYQSLRLTQMGLSLNIDVSARSFYEPILVSEFVANHCRLSNLSKPLSVQDHI
KVKRALRGVRVKLIYMIYAKTCKIIGVSRDPISQLTFTLDDKRANVSVIKYFREKYNVVL
KYPSLPALQSGSQARPVYLPMELCSIVEGQRYTKKLNEQQVRSLLRATCQRPNIREGKMV
QVNNFEVEEPITKEFGMHVRKELALIDAQVLNPPALKYHDTGRDKIVNPSCGQWNMINKK
MVNGGKVDFWTCVDFSSGYWNMSEDFCEELVKMCNSKGMVFCRTPSIAMRSARSDRIDQT
LVDVYKESAGLNKPLQLLIIILPDQTGSYGKIKRICETELGIVSQCCKPVQASKFSNXYF
ENVALKINAKVGGRNTVLNDAILRRIPLVTDVPTIIFGADVTHPPPGEDSSSSIAAIVAS
MDWPEVTKYRGIVSAQTHRVEIIQDLYKQTKDPQKGLVEGGMVRELLLAFFKSTRQKPSR
IILYRAGVSEGQFSQVLLYEMDAIRRACSSLQEGYMPRVTFVVVQKRHHTRLFPTDRNKT
DRSGNILPGTVVDTSICHPTEFDFYLNSHAGIQGTSKPTHYHVLFDENGFTADILQVLTN
SLCYTYARYTKSVSIVPPAYYAHLAARRARYYIGDEMSDGDKVRPLPSIRDNVKEVMFYI
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtctagacggtggtggacgtggcagtggtcggggtggtggtggacgtggccgg
gggtatggccatcctcgctgtcaaccttcacagtcttcctctcgcggcggcggcggcggc
ggcggtagagcaaggggccgtggatcatctggttctactgtaacttataacccccctcct
cctcagatggctccggctcagccacctcctcaaatggcagtagctccgctgggggtccct
ttttctcatccttcttcaagttctggtgtaggatcactttccagagaggtatcggagaag
cttacaatggagccggtggctgtgactacggcgcctcctcttcctccgtcgtcgtcaaag
gcgattatgttcccgccaagaccggggttcggcacggtcggtacaaaatgtctggttaga
gccaaccattttctcgtagatgttgctgatgccgatcttcatcactacgatgttactata
acgcctaaggtaaccggaaaaaaggttaacagagccataatgaagcaacttattgatgta
tacaaagagtcgcatcttggacgtcggtgtccagtttatgatggcaggaagagtttgtac
actgctggtcctcttcccttcgagtcaaaggagcttgttatcaagctaactgaggaagat
tgcagtgatggttcatctaggcctgcgtggaaggagcgacaatttaaggttgcaatcaaa
ctggcctccaagacagaccttcattatctgagggagtttttgagcagaaggcattttgaa
tgccctcaagaagctattcaagttctgaatgttgttcttagagctaaaccatctcagata
tatactgaggtgggaaggtcttttttccatacatcattaggtcctagaggagatcttggt
aatggaatagaatactggtctggatattatcagagtcttcgactcactcagatgggttta
tctcttaatattgatgtgtctgctcgatcattctatgagccaattttagtatcagagttt
gttgcgaatcattgcagactatcaaacctgtcaaagccgctgtctgttcaagatcatatt
aaagtgaaaagggccttgaggggagtaagagttaagctcatctacatgatttatgccaaa
acttgcaagattattggagtatctagagaccctataagtcagttgacatttactctcgat
gacaagagagcaaatgtctctgtgatcaagtatttccgtgagaaatacaatgttgtgctt
aaatatccatccttgcctgcacttcaaagtggaagtcaagctagacctgtctacctgcca
atggagctttgtagtatcgttgagggtcagagatacacaaaaaaactaaatgaacaacaa
gttagatctctgctaagagcaacttgtcaacgtccgaacattagggaggggaagatggtc
caggtcaataattttgaggtggaggagcctattactaaagaatttggaatgcatgttcgc
aaagaacttgcgttgattgatgcacaagttctaaatcctccagcgctaaagtatcacgac
actggacgtgacaaaattgttaatcctagttgtgggcaatggaacatgatcaacaagaaa
atggtcaatgggggtaaagtcgatttctggacttgtgtggacttctcctctggatattgg
aatatgtcagaagacttctgtgaagagctggtgaaaatgtgtaacagcaaaggaatggtg
ttttgccgaactccttcaattgcaatgcgatcagctcgttctgatcgaattgatcagact
ctcgtggatgtatacaaagagtctgctggcttgaataagccacttcagttgttgataatt
atcttacctgatcagactggctcttacggaaaaataaagcgaatttgtgagacggagcta
ggtattgtttcacaatgttgtaagcctgtgcaagcttcaaagtttagcaactaatatttt
gaaaatgttgctctcaagatcaatgctaaggttggggggcgaaatactgtgctgaatgat
gctattttaaggagaattccgcttgtgactgatgtccctacaatcatttttggggcagat
gtcactcatccgccgcctggcgaagactctagttcttctatagctgcaatcgttgcatca
atggattggcctgaggtaaccaagtatcgtggaattgtctctgcacagactcaccgggtg
gaaataatccaggatctttataaacaaactaaggatccacaaaagggtttagttgagggt
ggaatggttagggagttgcttcttgctttcttcaagtcgacaagacaaaagccttctaga
attatcttgtacagagctggtgttagtgaaggacaattcagccaagttttgctttatgaa
atggatgcaattcggagggcttgttcctcactacaggaaggatatatgcctcgggttaca
tttgttgtggttcaaaagaggcatcatactcgcttattccctactgatcgcaacaaaact
gataggagtggcaatatattaccaggtactgttgtggatactagcatctgtcatccaact
gagtttgatttttatctcaatagtcatgctggaatccaggggacaagcaagcccacacat
taccacgttttgtttgatgaaaatggcttcactgctgacatcttgcaagtgctcacaaac
agtttatgttacacgtatgcgaggtataccaagtctgtttccatagtgcctccggcatac
tatgctcacctcgctgctcgtagggcacgctattatattggggatgagatgtcagatgga
gacaaggttaggccgctccccagcataagggataatgtgaaggaagtgatgttctacatc
tga
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