Gossypium arboreum (tree cotton): 108454723
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Entry
108454723 CDS
T05776
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00061
Fatty acid biosynthesis
gab00071
Fatty acid degradation
gab01100
Metabolic pathways
gab01212
Fatty acid metabolism
gab04146
Peroxisome
Module
gab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108454723
00071 Fatty acid degradation
108454723
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108454723
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gab01004
]
108454723
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108454723
Enzymes [BR:
gab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108454723
Lipid biosynthesis proteins [BR:
gab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108454723
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of breast milk
108454723
Exosomal proteins of breast cancer cells
108454723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108454723
NCBI-ProteinID:
XP_017608761
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Position
9:55173386..55183755
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AA seq
715 aa
AA seq
DB search
MSSLKSKRAIPENGKGFTSMDSTTAQRRLNSIHAHLVSVVDSAFSHSHLRSSPTAAEFLS
EQNYSVVLPEKLQTGKWNVYRSARSPLKLVSRFPNHPDIGTLHDNFLLAVDFFGDNNYLG
TRIRVDGTVGEYKWMTYREAATARTAIGCGLIHHGILKGSCIGLYFINRPEWIIVDHACS
AYSLISVPLYDTLGPDAVKYIINHAELKAVFCVPQTLNPLLSILSEIPSVRLIVVVGGME
NEVPSLPSSTGIQIVTYSRLLNQGRSYLQPFCQPKPDDIASICYTSGTTGTPKGVVLTHG
NLIANAAGFSLAVKFNPRDVYISYLPLAHIFERFNQINLAHYGVAVGFYQGDNMRLMDDL
AALRPTLFCSVPRLYNRIYAGILNAVKESGTLKERLFNAAYNSKKQAIMNGKSPSPIWDR
LVFNKIKARLGGRVRFMASGASPLSPDVMDFLKICFGGHIIEGYGMTETSCVISCMDEGD
ILSGHVGSPNPACEIKLVDVPEMNYTSDDQPYPRGEICVRGPIVFQGYYKDEMQTREVLD
EDGWLHTGDIGLWHTGGRLKIIDRKKNIFKLAQGEYIAPEKVENVYAKCKFIAQCFIYGD
SLNSSLVAIVSVDQDALKAWASSQGIKYKDLEQLCNDPRARAAVQAEMDAVGRDAQLRGF
EFAKSVTLVLEPFTMENGLLTPTFKIKRAQAKAYFAKAISDMYAELTTSDSSPVK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattaaaatccaaacgcgccataccagaaaacgggaaaggattcacctcaatg
gattccaccacagctcaacgtcgacttaactccattcatgcccaccttgtttcagtcgtt
gactccgccttttctcattcccacctccgctcttccccaaccgctgctgagttcctctct
gaacagaattacagtgttgtgctgccagagaaattgcagacaggaaaatggaatgtatac
agatctgctcgctctccgttgaagctagtatcgcgatttcccaatcatcctgatattggt
acattgcacgacaattttttactcgccgttgatttctttggagataacaattatctcggt
acaagaattcgagtcgatggaacggttggagagtataagtggatgacataccgagaagct
gctacagctcgaacagccattggttgcggcctaatacatcatggaatactaaagggctct
tgtattggattatatttcatcaatagaccagaatggatcattgttgatcatgcttgctct
gcgtattcccttatatcagttcctttatatgacactctaggtccagatgctgtcaagtac
atcataaatcatgcggaactaaaagccgtattttgcgtgcctcagactttgaatcctttg
ctgagcattttgtccgagattccatctgttcgtttgattgtggtggttggaggaatggaa
aatgaagtgccttcattgccatcatcaactggcattcagattgtgacatattcaagatta
ttaaatcagggccgtagttaccttcagcctttttgccaaccaaaaccagacgacattgct
agcatttgctacaccagtggtacaacaggaacaccaaagggagttgtgttgacacatgga
aacttgattgcaaatgctgccggcttctccttagctgtaaaatttaaccccagagacgtt
tacatatcgtatcttcctttggcacacattttcgaacgatttaatcagatcaatttagct
cattatggagttgcagttggattctaccagggggataacatgagattgatggatgatctg
gctgctctacgacctaccttattctgcagcgtccctagactgtataacagaatttatgca
ggtattctgaacgctgtgaaggaatcgggtaccctgaaggagaggctttttaatgctgcc
tacaactctaagaagcaagcaataatgaatggaaagagtccttctcccatatgggacaga
ttggtattcaacaaaataaaagctagacttggaggacgtgttcgttttatggcttccggt
gcttcacccttgtctcctgatgtcatggacttcttgaagatatgctttggtggtcatata
attgaaggttatggaatgaccgagacatcatgtgtcataagttgcatggatgagggtgat
attctttctggccatgttggctctcctaatccagcttgtgaaataaagctggtggacgtc
ccagaaatgaactacacatcagatgaccagccttatcctcgtggagaaatctgtgttagg
ggtccaattgttttccaaggatattacaaagatgaaatgcaaacgagagaagtacttgat
gaagatggatggcttcataccggggatatagggctatggcatactggaggccgtctaaag
attattgataggaagaagaatatttttaagctggctcagggagagtacatagctccggaa
aaggttgaaaatgtatatgctaaatgcaaatttatagcccagtgttttatatatggagac
agccttaattcttcattagtagcaattgtgtcggtggaccaagatgctcttaaagcatgg
gcctcatctcaaggcattaagtacaaagatttagaacagttgtgcaatgacccaagggca
agagctgctgtacaggctgagatggatgctgttggaagagatgctcagttgagaggcttc
gaatttgcaaaatccgtgacgttggtgctcgaaccctttaccatggaaaatggtctcctt
actcctacatttaagattaagagagcccaagcaaaggcgtattttgcaaaagcaatttca
gatatgtatgcagagcttactacatccgattcctctcctgttaaataa
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