Gossypium arboreum (tree cotton): 108455144
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Entry
108455144 CDS
T05776
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108455144
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108455144
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108455144
NCBI-ProteinID:
XP_052875035
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Position
9:complement(3205194..3211190)
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AA seq
426 aa
AA seq
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MALQIVFFSIFFFVSFTIAQGVRTLNVRNYGAIADGRTDNKKAFLRAWNDACYQNGGSIV
YIPKGVYMVGSVEFAGPCRGPIMFLISGDLKAPNGGPYSNVEKWIGFQHVNNLIVKGGGT
LDGQGPSAWPYNKCQKTNNCDPLPISIKFDFVTNSRIESIRSVNSKNVHLAIYGCNNVNV
SKVDLLAPADSPNTDGIKISRSADIRITNSRIRTGDDCIAIISGSSNIDVSYVYCGPGHG
ISIGSLGKYKNEENVNGVTVRKCTLNGTDNGVRIKSWESPYAITASKFLFQDIFMENVRN
PIIVDQTYCPHSPCNQETASHVQIQDVTYRNVWGTSSSQVAVSFECSKKFPCKNIVMTDV
NLASVGGEELESGKETAGDLKTIIIVNPRLLMAILKKAQVDALTGAVEWVANWHGAIGQG
SEAAVA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctctccaaattgttttcttttcaattttcttctttgtctccttcactatagctcaa
ggtgtaagaactttgaatgttagaaattacggagccattgctgatggccgaacagacaat
aaaaaggcttttcttcgagcatggaatgatgcttgctatcagaatggaggttctatagtt
tatatacctaaaggagtgtacatggtgggatcagttgaatttgcaggtccttgtagagga
ccaataatgtttttaatcagtggagatttaaaggctccaaatggaggaccttattccaat
gttgagaaatggataggatttcaacatgtaaataacttaatagttaaaggtggtggaaca
ttggatggtcagggaccttctgcttggccttacaacaaatgtcaaaagaccaacaattgt
gaccctcttccaatttcaattaaattcgactttgtgacaaattcaaggattgaatccata
agatcagtcaatagtaaaaatgttcatcttgcaatctacggttgcaacaatgtaaacgtg
tcgaaagtcgatttgttagctcctgccgacagtcccaacaccgatggaatcaagatcagc
cggtcggctgacattcgaattaccaactctagaataagaacaggtgatgattgtatcgcc
atcatctctggaagctccaacattgatgtgtcctatgtttattgtggtcctggacatggt
atcagcattggaagccttggtaagtataaaaatgaagagaatgttaatggtgtgactgta
agaaaatgtaccctcaatggaacagacaatggtgttagaatcaaatcatgggaatctcct
tatgcaatcactgcttcaaagtttttatttcaagacatttttatggagaatgttagaaac
ccaatcattgttgaccagacatattgccctcactctccatgcaatcaagagacagcttct
catgtccaaatccaagatgttacatataggaacgtatggggaacttcgagttctcaagtt
gcagtttcgtttgaatgtagtaaaaaatttccatgcaagaacatagtgatgactgatgtt
aatttggcaagtgttggaggtgaagagctagaatccggcaaggagaccgccggggatctc
aaaaccattatcatcgtaaacccacgattactgatggcgattttgaaaaaggcgcaagtg
gatgcactgactggggcggtggagtgggtggccaactggcatggggcgattggacagggg
tcagaggcggcagtagcttga
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