Gossypium arboreum (tree cotton): 108455163
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Entry
108455163 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108455163
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108455163
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
108455163
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
108455163
NCBI-ProteinID:
XP_017609253
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Position
9:6761976..6789938
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AA seq
817 aa
AA seq
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MATLKIFFFVLLIQCTIFTGSSRQLKKSNINIDSYGDNTANVISFGAIGDGKKDDSKGFK
RAWDACDSSTPSPTFLVPQGKTFLLQPLTFNGKHCNSNNITFQIDGRIIAPTKPSTWECN
TNCHHWIGFMNFDGLHIQGSGTINGQGDNWWKLSCKDNQKSCQLRKPTGFMIGHSKNVDI
KGLTFEDSPKMHIAFEDSTSIHATQLTIKAPGNSPNTDGIHIQRSTNVSIHNTTIQTGDD
CISIGDGSKYINITNIECGPGHEISIGSLGIMGKTEKVEFVHVRNVSFHGTTNGVRIKTW
QGGHGHARNIRFEDITSHASTRPIVIDQYYCPHKQCKNQTSALEISNIAYENINGTSQKE
TAVQLSCSEFNPCRNITMKNINLRNKKQKGKTSSYCLNAHGLRNGKCTIFTSSSRQLKKS
NINIDSYGDNTFNVISFGAIGDGKKDDSKGFKRAWDAACDSSTPSPTFLVPQGKTFLLQP
LTFNGKHCNSNNITFQIDGRIIAPTKPSAWECNTNCHHWIGFKNFDGLHIQGSGTINGQG
DNWWKLSCKDNQKTCQLRKPTGFMIGHSKNVDIKGLTFEDSPKMHIAFEDSTSIHATQLT
IKAPGNSPNTDGIHIQRSTNVSIHNTTIQTGFFLSSFAGDDCISIGDGSKYINITNIECS
PGHGISIGSLGIMGKTEEVEFVHGGHGHARNIRFEDITSHASTRPIVTDQYYCPHKQCKN
QTSAVKINNIDYENINGTSHKETAVQLSCNESRPCRNITVETIFLKKQGSTLVTVKAMGR
GLGGTDNAHGRVGGAAPNLSETLGFLIRFRFLGLWAP
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttgaaaatcttcttctttgtccttttgatccaatgcactatattcactggc
tcttctcgtcagttgaagaagagcaacataaatattgatagctatggtgacaatacagcc
aatgtcattagctttggagctattggagatggaaagaaggatgattctaaggggtttaag
cgtgcatgggatgcttgcgattcatcaactccgtcaccaacctttcttgtacctcaaggg
aagacgtttctgctgcaacctttaactttcaacggcaaacattgcaactctaataacatt
actttccagattgatgggagaatcatagccccaaccaaaccttctacatgggaatgcaat
acaaattgtcaccattggattggctttatgaatttcgatggtctccacattcaaggatct
ggtaccatcaatggccagggagataattggtggaaactttcttgcaaagataaccaaaag
tcgtgccaacttcggaaaccaacgggttttatgataggacactccaagaatgtagatatc
aaaggtttaacctttgaagacagtcccaaaatgcacattgcatttgaagactctacttcg
attcatgccacacaacttacaatcaaagctcctggaaacagccccaacactgatggcatt
cacatccaacgttccaccaatgtctctatccacaatacaaccattcaaaccggtgatgat
tgtatatcaattggagacggctctaaatatatcaatattactaacatcgaatgtggtccg
ggtcatgaaataagcattgggagccttggaattatggggaaaactgagaaagttgaattt
gttcatgtaagaaatgtttctttccatggaacaactaatggagttagaatcaaaacttgg
cagggaggacatggtcatgcgaggaacattagatttgaagatataacttctcatgcttca
actcgacctattgttatcgatcaatattattgtcctcataaacaatgcaaaaatcaaaca
tcagctctagaaattagcaatatagcttatgaaaacatcaatggcacatcacagaaagaa
acagcagtacaactttcatgtagtgaattcaatccttgtagaaacattaccatgaaaaac
attaacttgagaaataagaagcaaaaaggcaaaacttcatcgtattgcctcaatgctcat
ggcttgagaaatggaaagtgcactatattcactagctcttctcgtcagttgaagaagagc
aacataaatattgatagctatggtgacaatacattcaatgtcattagctttggagctatt
ggagatggaaagaaggatgattctaaggggtttaagcgtgcatgggatgctgcttgcgat
tcatcaactccgtcaccaacctttcttgtacctcaagggaagacgtttctgctgcaacct
ttaactttcaacggcaaacattgcaactctaataacattactttccagattgatgggaga
atcatagccccaaccaaaccttctgcatgggaatgcaatacaaattgtcaccattggatt
ggctttaagaatttcgatggtctccatattcaaggatctggtaccatcaatggccaggga
gataattggtggaaactttcttgcaaagataaccaaaagacgtgccaacttcggaaacca
acgggttttatgataggacactccaagaatgtagatatcaaaggtttaacctttgaagac
agtcccaaaatgcacattgcatttgaagactctacttcaattcatgccactcaacttaca
atcaaagctccgggaaacagccccaacactgatggcattcacatccaacgttccaccaat
gtctctatccacaatacaaccattcaaaccggtttctttctttcttcctttgctggtgat
gattgtatatcaattggagatggctctaaatatattaatatcactaacatcgaatgcagt
ccgggtcacggaataagcattgggagccttggaattatggggaaaactgaggaagttgaa
tttgttcatggaggacatggtcatgcaaggaacattagatttgaagatataacttctcat
gcttcaactcgacctattgttaccgatcaatattattgccctcataaacaatgcaagaat
caaacatcagctgtaaagattaacaatatagattatgaaaacatcaatggcacatcacat
aaagaaacagcagtgcagctttcttgcaatgaatccagaccttgtagaaacattactgtc
gaaaccatttttttgaaaaaacagggatctactttggtgacagtgaaggcgatgggacgg
ggccttggaggcactgacaatgcacatgggagggtaggaggagcggcgcctaacctttca
gaaaccctaggatttctgattaggtttaggttcttgggcctttgggccccataa
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