KEGG   Gossypium arboreum (tree cotton): 108455165
Entry
108455165         CDS       T05776                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108455165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108455165
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108455165
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     108455165
SSDB
Other DBs
NCBI-GeneID: 108455165
NCBI-ProteinID: XP_017609258
UniProt: A0A0B0PN38
LinkDB
Position
7:complement(14492565..14498247)
AA seq 795 aa
MERSDGKLPINFFQTSSDNAHFDASQYEFFGQNAMEEVELGGLEDGEVEGPVFASIEDDE
YHLFDRGDVGSLGSLSDMDDLASTFAKLNRVVTGPRHPGVIGDRSCSFSRESSSATDWAV
DGEHLNWMDQHMFETEDSQESKRWSSQPQLTSARFSESKPLYRTSSYPQQLPEPHFSSEP
IVEPKPSIFTSFPPPGSRCQQSSPGNLKVPVLTSGSPSPFSAASLSSLSNSSLHLAGLSH
GLHFGGNLSQLTSPGPSFSSRSLNHWVNQSGLLLGERAGLLHLMLQQQIPHQNGLLFPQL
MSPQQQRMHHSVQPSLAHFAALQSQVYKSHPSHKMMLGLADLREHRTKSSQRNRQSMRLS
PQSSDAGSQKSESGLVQFRSKYMTGEEIESILKMQHAATHSNDPYVDDYYHQACVAKRSG
SRAKHQFYPSHPKESHSRTRNSGEQHLHHHVDALGKVPLSSIRRPRPLLEVDPPLGSGDG
SDQKTERPLEQEPMLAARITIEDGLYLLLEIDDIDRLIQFSQPQDGGAQLKRRRQILLEG
MAASLQLVDPLSKGGHAVSCAPKDDIVFLRLVSLAKGRKLITRLLQVLIPGSELMRIVCM
TIFRYLRFLFGGLSADLEAAETTNDLAKTVSVCVNGMDLRALSACLVAVVCSSEQPPLRP
LGSPAGDGASVIIKSVLERASQLLSHPSGNCSMPNYTLWRASFDEFFALLTKYCVSKYET
IIQSIHNQPQPTTEVIGSEAIRREMPCELLRASLPHTNESQRKLLMDFSQRSVPMNGSNS
PAGSTSRINSESVRV
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggagagatcggatggcaaacttcctatcaacttctttcaaacttcctcagataatgcg
cattttgatgcttcccagtacgaattttttggtcaaaatgccatggaagaagtggagttg
ggaggtttggaagatggtgaagtggaaggtcctgtttttgcatccattgaagatgacgaa
taccatttgtttgatagaggagatgttgggagtttagggtcactatctgacatggatgat
ttggctagtacttttgcaaagttgaatagggttgtcacaggaccaagacatccaggagtt
attggtgatagatcctgttctttttcaagggaaagttcatctgctactgactgggctgta
gatggagagcatttaaactggatggatcagcatatgtttgaaacagaagattcccaagaa
agcaaaagatggtcctcacagccacaactgacttctgctcgtttttcagaatcaaagcct
ttgtatagaacttcgtcatatccccagcagctgccagagcctcacttctcaagtgaacca
attgttgagcccaaaccatcaatcttcacatctttccctcctcctggtagcagatgccaa
caatcttcacctggcaacctaaaagttccggttcttactagtggatctccgtcacccttt
tctgcagcaagcctctcttcattgtccaactccagtcttcatctggctggtctatctcat
ggattacattttggtggtaatttgtcccagttaacatctcctggcccatcttttagtagt
aggtcgctaaatcattgggttaaccagtctggtctactacttggagaacgtgctggtctt
ttgcatcttatgttgcaacagcaaatacctcatcaaaatggcctattgttcccacagtta
atgtcacctcaacagcagagaatgcaccattcagttcaaccatctttggcacattttgct
gcattgcaatctcaagtttataaatctcatccttcacataaaatgatgcttggactggct
gatcttagggaacatcgaactaaatcatcacaaagaaacaggcagagcatgcgtttgtct
ccgcaaagttctgatgctggtagccagaaaagtgagagtgggttggtacaattcagatcc
aagtatatgactggtgaagagatagagagtattctcaagatgcagcatgccgccacgcat
agtaacgatccttatgtagatgattattaccaccaagcttgtgttgccaaaagatctgga
tccagggctaaacatcaattttacccatctcacccgaaagaatcacattctcgaacccgt
aacagtggagagcagcatttgcatcaccatgttgatgcacttgggaaggtccccctctct
tccattcgtagaccccgtcctctacttgaagttgatcctcccttgggctcaggtgatggt
tctgatcagaaaactgagaggcctctggagcaggaacctatgcttgcagctagaatcacc
attgaagatggtctctaccttcttcttgaaatagatgatattgaccggctcatacaattc
agtcagccccaagatggtggggctcagctcaaaaggaggcggcagatcctgcttgaaggt
atggcagcatcacttcagcttgttgatccgcttagcaaaggtgggcatgcagttagctgt
gctcccaaagacgacatcgtgttcctaagattagtctcccttgcaaaaggccggaagctc
atcactaggctccttcaggttctcatccctggtagtgagcttatgcgaatagtgtgcatg
accattttccgttacttgagattcttgtttggtggtctttctgctgatctggaagcagct
gagacaactaatgaccttgcaaagacagtttccgtgtgtgttaatggcatggatcttcgt
gcacttagtgcgtgccttgttgcagttgtttgttcttcggagcaaccaccacttaggcct
cttggaagccctgctggggatggtgcttctgtgatcataaaatcagttcttgaaagggcc
agtcaacttctaagtcatccctctggaaattgcagcatgcctaattatactctctggagg
gcttcattcgatgaattttttgcccttcttaccaagtactgtgttagtaaatatgagaca
ataatccaatcaatacataaccagcctcagccaaccacagaagtcatcggttcagaggct
ataaggcgtgaaatgccttgtgaacttctacgagctagtcttcctcacactaatgaatcc
cagaggaagcttttgatggacttttctcagcgttcggtgcccatgaacggatccaattca
cctgctggaagtactagccgaatcaactctgaatcggtaagggtctaa

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