KEGG   Gossypium arboreum (tree cotton): 108455320
Entry
108455320         CDS       T05776                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X2
  KO
K10846  DNA excision repair protein ERCC-5
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108455320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gab03400]
    108455320
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108455320
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 108455320
NCBI-ProteinID: XP_017609388
LinkDB
Position
7:2131551..2141530
AA seq 1701 aa
MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR
RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK
ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI
AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS
NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLANASTSVAAIPSEEDGDEDEEM
ILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYL
KTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDED
KQQERHSDHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVRGM
GIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRDDN
GESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEKSL
RKQASGSDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEPSDAPKS
SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFE
SLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPERPSPVHNSDK
NMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVDGLSTISDSW
FKVNSHSFDAAHDKKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPSQQSVDTVDL
SIPTVQSSANKVIFDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIQFSKASLD
EELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM
ELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALL
LGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDPTILGKLNVQEGSSAWKRG
PKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTDCINDIKQIFMDKHRNVSK
NWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLP
VLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQASKSRN
KRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSRKRQNSGKDVSFEMRTPEP
QLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNDNQEVDGEKLD
QPREVRRSMRTRNPVNYTVNDLEDEGGLSHKESSGEDAMEKEAVEDVKEKIQCEAREPSL
DNIDGDYLETGGGFCMDERGTDLPDANQDFDLETEPTNDYLKMGGGFCMEGDIDQSDTSQ
DINPFSETGSANDYLKMGGGFCMEESETIDNPDAGNYQDPVQATESSNCFAFTDKADDNI
DSAEPSVNAEGSLLDKLQNGGKTPNEANDALNLSHQNAANKDDSKESASLRETSDVRTTF
ISVLSAMPSLKRKRRRRNLIR
NT seq 5106 nt   +upstreamnt  +downstreamnt
atgggagttcacggtctatgggaactgctagctcccgtcggccgccgcgtgtccgtcgaa
accctagccggaaagaaactcgccatcgatgcaagtatttggatggttcaattcatgaaa
gcgatgcgagatgagaagggagaaatgattcgaaacgcgcatttgttagggttttttagg
agaatttgcaagcttttatatctaaaaactaaacctgttttcgtcttcgacggtgccaca
cctattctcaagcgccgcaccgtcattgctcgacgtcgacagagagaaaacgctcaggct
aagatccgtaaaacggctgaaaaattgctcctaaatcaactaaagcaaatgagactgaaa
gagttggctaaggatcttgacaaccagaggaaaatgcagaagaataataataaggataag
ggtaagatggtttcttcagataaccaatctgacactaactttgtggggtgtaatgccaac
gtggaattgacaaaagaaggtgatgtaaagctgaaagaaaaattggaagtgcctagtatt
gcaaaggatgggggtcagaatgaagatgaagatgaagatgaagtgataatactgccagat
attgatgaaaatattgatcctgatgttttagctgcattgccacaatcaatgcaacgacag
cttcttaagcagactgatgctaagggtaagaagattttattaaatgacctgaatcaatct
aacaaggagaggagtagcacggaacacgatgctatgaaatcaactagttacagtcaggaa
aagctggatgaaatgttggcagcgtctcttgcaaccaaggaagatagcaatttagctaat
gcatcaacatcagttgcagccatcccttctgaggaggatggtgatgaagatgaagagatg
atacttccagcaatgcatgggaatgttgatccagctgttttagctgctttgcctccatct
ctgcaacttgatcttcttggtcagatgcgggaaagattgatggctgaaaatagacaaaag
tatcaaaaagttaaaaaggcacctgaaaagttctccgagctgcaaatacagtcttatctt
aaaactgttgctttccgtcgagagatagatgaagttcagagagctgctgctgggcaaggg
gttgctggtgtacagacttccaggatagcttctgaagccaacagagaatttattttttca
tcatcatttactggagacaaacaggcatttacgtctgctagaaaagagagagatgaagat
aagcaacaagagagacattcagatcatccctcaggttttctgggtagtgttaaatcaagc
tgtaagtccaatgtggcagcagaatcagtccctgatgaatctactagtgctcctcatgaa
gatgttgggacatatcttgatgagacaggccgtgtacgtgtcagtagagtgcgaggtatg
ggaattcgtatgactcgtgatttacaaaggaacttagatttgatgaaagagattgagaag
gaaagaacaaatttgaataagggtgtgaatgtgcagtctgttccagataagagcaaaatt
gacgcttcaaagagtgtatctaatggaaatcagtttgtagaaacttcacgtgatgataat
ggtgaatctgtaaatgtgaatgagagcaaccggaagtctgcatttgaaaccgaatcttgt
atggaaataacttttgaggatgatggaaagacggagtattttgatgatgatgatgatatt
tttgcatgcttagcagcaggtgatcctgtaacactaccttctcctaaggaaaaatctttg
agaaagcaggcttcgggttctgattcagattttgagtgggaggagggagtggttgaagga
aaatgggatgatgttactcctggtatgaatgctgaacataatcttttgaataaggaaagc
aatattaatgatgatagtgaagtggaatgggaggaagagccttctgatgctcccaagagt
tcctctggacctgttgaatcaggtagaatgctctctaaaggttactgggaagaggagtct
gatctacaggaggcaataaggagaagtctaacagatgtaggtgttgaaaaatctaattct
tttccttctgatgttattgaatcaaaaaacttaggagaaaacttggatgaagattttgaa
tctctgcatgagaaaggtgatacaggtgcaagtagttttccgggggatgctgttaattgg
cagaataagtcttgtgaaaatttagatagaccccagaagccatgtactgggaatgaacca
attatatcagaaacctttaattctcctgagaggccatcacctgtacataattctgataaa
aacatgacaatattgagtaaattttctgaaagatctgatggttctcattctgagcaatct
aggcacaatgaaactgcagaatttgttgcaacactggaaaaggaggtcgattttcctaca
gggaaacacttggatgtttctgaggaggttgatgggttgtctaccatctctgacagttgg
tttaaggttaattctcatagttttgatgcagcacatgataagaaaactgtttctgaaaat
gaaccatctaacctggtcaatgtcaatacaagtagtgttgaagctgaaattctggatcaa
gataagaaaattgattttgaagctaaaccatcgcagcaatcagttgacacagttgactta
tccattcccacggtgcagtcatctgcgaataaagtaatatttgatcttcacattgagcaa
gaactgtcaggggatataacttatgaaaattgtgtcaacaaagcagagcagcatacagac
atgtctaccattaagggcaatgataatgaagaaattcagttctcaaaggctagcttggat
gaggagctgctaattctagatcaggaatgtatcaatatggtagatgagcagaggaagcta
gaacgtaatgcagaatctgtcagtagtgaaatgttcgcagagtgtcaggaactgctgcaa
atgtttggcttaccctacattattgcaccgatggaggcagaagctcaatgtgcttatatg
gagctaacaaaccttgttgatggtgttgtcactgatgattctgatgtattcttgtttggg
gcacgaagtgtttacaagaatatatttgatgataggaaatatgtggagacttactttatg
caggacattgagaaggaacttggtttgacaagggaaaagttaatgcgaatggcattgctt
ctggggagtgactacactgaaggggttagtggaattggtattgttaatgctattgaggta
gtgaatgcattcccagaagaagatggacttcataaattccaggagtggattgagtcccca
gatcctactatcttggggaagctcaatgtgcaagaaggatctagtgcatggaaaagaggg
ccaaaatccacagaaaaagatgtaaatagtacaaaaaccagcacgggaggatctgaaagc
aacaatggagcgtcttcacttgaccagaacagttttcaagctgacaagaacatgcagtct
acagattgtatcaatgatataaagcagattttcatggataagcatagaaatgtgagcaaa
aactggcacataccctcatcattcccaagtgaagcagttatttctgcatattctttgcca
caagtagataagtcaactgaaccattcacatggggaaggccagatctttttgttcttcgc
aaactgtgctgggagaagtttggatggggtagtcagaaatcggatgagttgctactgcct
gttttaagagagtacgaaaaacgagagactcaattgcgaatggaagccttttacactttc
aatgaaagatttgctaaaatacgtagcaagagaattaagaaagctgttaaaggaatcact
ggaaaccaatcctcggagttgatagatgatggcatgcaacaagcttctaaaagtaggaac
aaaagaagagttagcccagtccaaagtggagatgataaatcaggggaaccttcaaacaag
aaagaggacattgcttctcaatgtcagagtaaatccacggacaaatcagtgcctaagaca
tcaaggaaacgacagaactctggaaaggatgtttcatttgagatgagaactccagaacca
caactgcggacattgcgcaggcgaaaaaccaacaaacaatcagctgggaatggaagaggt
agaggtggtggtgaaggaagaaggcgtaaaggaagttctggttttcagcagtttgaaacc
agctcttctggtggtgatagcggcaatgataaccaggaagttgatggggagaagttagat
cagccacgggaagtgcgaaggtccatgcgtactcgaaaccctgtgaattacactgtgaat
gacctagaagacgagggtggcttgagccataaagaatcctctggtgaagatgcaatggag
aaagaagctgttgaagatgtaaaggaaaagattcagtgtgaagctagagagccttctctt
gacaatatcgatggagactatcttgaaacaggaggcggattttgtatggacgagagagga
actgatctacccgatgctaaccaagattttgatcttgaaactgaaccaactaatgattac
ctgaaaatgggaggtggattttgcatggaaggagacattgatcaatctgatacaagccaa
gacatcaatcccttttctgaaaccggatcagccaatgattacctgaaaatgggaggtgga
ttttgcatggaagaaagtgagacaattgataacccagatgccggtaactaccaagatcct
gtacaagcaactgagtcttcaaactgctttgcttttacagacaaagctgacgataatatt
gattcagctgaaccatctgtcaatgctgaaggatcactactggataaacttcaaaatgga
gggaagacacctaatgaagcaaatgatgctctgaatctaagccatcagaatgctgcaaat
aaagatgattctaaggaaagtgcatcacttcgggagacaagtgatgtcagaacaacattc
atcagtgttctaagcgcaatgcctagcttgaagagaaagcgcaggaggaggaatctaata
agataa

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