KEGG   Gossypium arboreum (tree cotton): 108455372
Entry
108455372         CDS       T05776                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
gab03015  mRNA surveillance pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108455372
  09122 Translation
   03013 Nucleocytoplasmic transport
    108455372
   03015 mRNA surveillance pathway
    108455372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108455372
   03041 Spliceosome [BR:gab03041]
    108455372
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108455372
    TREX complex
     108455372
Spliceosome [BR:gab03041]
 Complex C
  Other components
   EJC/TREX
    108455372
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108455372
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 Btz
Other DBs
NCBI-GeneID: 108455372
NCBI-ProteinID: XP_017609430
UniProt: A0A0B0NJL6
LinkDB
Position
7:complement(88888947..88891405)
AA seq 241 aa
MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSAPYTAAKAPETTW
QHDMYSDKGAALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYGIHYD
RSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPIKIEIVGTNIATPTAPSAANGTFGS
SNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDLDADLEKYHSEAMQT
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtcaagtgctttagagatgtcgctagacgatctcatcaagcgcagccgtaagtctgga
tccggaaactcccggggtcgaggccgtggatccacggcgggacccgcccgccgcattcct
aaccgccgagcgaaccgctccgcaccctataccgctgctaaggcgccggagacgacgtgg
cagcacgatatgtattcggataagggagcagcgttgcaaggacaagcaggtcgggcctcc
gcaatagaaactgggacgaagctttatatctctaatttagattatggtgtttccaatgac
gacatcaaggagttattttcggaggttggtgacctgaaaagatatgggatccattatgat
agaagcgggagatcgaagggaacggcagaagttgtcttctcgaggcgaacagatgctatg
gctgcggtcaagagatacaacaatgttcagcttgatgggaagccgattaaaatcgaaatt
gtgggaacaaacattgctactcctactgcaccttcagcagctaatggcacctttggaagt
tcaaatggagcccctagaggtggccaaggcaggggtggaggatttggtaggcaacgtggt
ggtgctggaggtcgtggctttggaagaggccgtggacagggaaagggccgtggagaaaag
gtttctgctgaagatcttgacgctgatctagagaagtatcattctgaagcaatgcagaca
aactga

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