Gossypium arboreum (tree cotton): 108455493
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Entry
108455493 CDS
T05776
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108455493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108455493
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108455493
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108455493
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
108455493
NCBI-ProteinID:
XP_052875542
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All DBs
Position
9:66079686..66084617
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AA seq
695 aa
AA seq
DB search
MVSSEGLCGSQPPIAAPVTQYGVTKPISMAGPTAADIQRSRDLEKFLVQAGLYESKEEAS
KREEVLGQIQEIVTNWVKQLTRLRGYTDQMVEDAKALIFTFGSYRLGVHGPGSDIDALCV
GPSYVSREEDFFFVLHNILAEREEVTELQPVPDAHVPVMRFKFNGIPIDLLYASISHLVV
PHDLDISDISVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYS
NVTGFLGGVNWALLVARICQLYPNAAPSMLVSRFFRVFTQWRWPNPVMLCAIDEDRLGFS
VWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNNVCEKIELNKAKW
SALFEPYLFFQSYTNYLQVDILAADADDLRSWKGWVESRLRQLTLMIERDTYGKLQCHPY
PQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQQFDIRGSVDEFRHSINMYMFWKPGMEIY
VSHVRRKQLPAYVYPDGCERSRNLHLTPEQPSYNMSRNNGVAYQAESGEKCLKRKKDPDG
EDSEQSRLDKRRSPDRNQSVSPEIISCKLGSTCTGCSTSDLDEMNRFAEVNTSSNSSGIS
SCSHEDIGNESTAGSSEGSNVGDDNPSSSQSDSSDDLKSSVEDDHADQNKVFQDGLLKDL
EPKTVVGVVLKSMNGVVDSESVQNPVIRLSLASTA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcagagggattatgtggttcgcagccgccgatagctgcgccagtgacgcag
tatggtgtgacaaagcctatttccatggcgggccccaccgcagccgacatacaaagaagt
cgtgatttggaaaagtttttggtgcaagctgggctatatgagagtaaagaggaagcatca
aagagagaagaagttcttggtcaaattcaagagattgtgacaaattgggttaagcaactt
actcgtttgaggggttatactgatcagatggttgaggatgcaaaggcactcatttttact
tttggttcttatcgacttggggttcatggacctggatctgacatagacgccctatgtgtg
ggaccatcttatgtgagccgagaggaagatttcttctttgtactgcacaacatcctggca
gaaagggaagaagttacagagttacaaccagttccggatgctcatgtccctgtaatgaga
ttcaagtttaatggaataccaattgatcttctttatgcaagcatctctcatttggttgtc
cctcatgatctggacatctcagacatttcagtactgtacaatgtagatgagcctactgtt
cgaagtcttaatggctgcagggttgcagatcaaattctgaaactggtgccgaatgttgag
cattttcgcacaacactccgatgtctgaagttttgggctaaaaggcgtggtgtttattcc
aatgtgactggatttctcgggggtgttaattgggcacttcttgtagctcgaatttgccaa
ctttatcctaatgcagctccaagtatgcttgtttcacgattttttagggtctttacccag
tggcgttggccaaacccagttatgctttgtgcaattgatgaagatagactcggattttct
gtttgggatcctcgtaaaaaccctcgtgataggactcatcatatgccaattatcacacct
gcctatccatgcatgaattctagctataatgtgtctacaagtacgcttcgagtcatgatg
gagcagttccaatatggtaacaacgtgtgtgagaaaattgagctgaataaagcaaagtgg
agtgctctgttcgagccttacttgttcttccaaagctacaccaactatctgcaggtggac
attcttgcagctgatgctgatgacttgcgttcttggaaaggctgggtggaatcccgtctg
aggcagctgactttgatgattgagcgagacacttatggaaagttgcagtgccatccttat
cctcaggattatgtagatgcctccaagccatgtgcccattgtgcattttttatgggttta
caaagaaaacatggagaaattgttcaagaaggtcaacagtttgatattcgcgggtcagtt
gatgagttccgccattcaataaatatgtacatgttttggaagcctgggatggaaatctat
gtatcacatgtccgtagaaagcagcttccggcttatgtttacccagatggctgtgaacgt
tctcggaatttacaccttactcccgagcagccgtcttacaatatgtctcgcaacaatggt
gttgcatatcaagctgaatctggtgagaaatgccttaaaaggaagaaggatcccgatgga
gaagatagtgagcaaagtaggctggataaacggaggagtcctgacaggaatcaatcagtt
tctcccgagattataagttgcaagcttggcagcacttgcacaggttgttctacatcagat
ctagatgaaatgaatagatttgctgaagtcaatacatcatcgaattccagtggtatcagc
tcctgctcacatgaggatattgggaatgaatctacagcaggtagtagtgaagggagcaat
gtaggtgatgataacccatcgtcttctcagagtgattcaagtgacgatctaaaatcttct
gtggaggatgaccatgctgatcagaacaaagtgttccaagatggattgctgaaagattta
gagccaaaaactgtggttggcgtggttcttaagtccatgaacggagttgtcgattcagaa
tctgtgcagaatcctgtgatacggttgagtttggcatcaacagcgtga
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