Gossypium arboreum (tree cotton): 108455514
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Entry
108455514 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108455514 isoform X1
KO
K23288
syndetin
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108455514
Membrane trafficking [BR:
gab04131
]
Protein recycling
Others
EARP complex
108455514
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
108455514
NCBI-ProteinID:
XP_017609553
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Position
7:86027196..86044139
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AA seq
1101 aa
AA seq
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MQQPQPQPNLFPFGSVFGNPILLNAGIGDLSDAGFESSRFFFLVPFLLFQGGGMDLSNVG
EKFLSSVRSARSLGLLPSVSSSDRPEVPARAAAAAAIARALAGLPPHQRYSFPSASEELR
SIYGSRPQSQVVEELEEDFYEEEFDPIKHILENIPSEEIDLEHFEKQATLRLAQLDIVAE
QLSHRVMEHHEVMVKGMNLVRELERDLKVANIICMNGRRHLTSSMNEVSRDLVVNTDSKK
KQALMDLLLVLAELLHARDMQVSLESLVQENNYCKAFQVLSEYLQVLDSFSELSVIQEMS
NGVEFWLGRALQKLDSLLLGVCQEFKEEGYLTVVDAYALLGDVSGLAEKMQSFFMQEVIS
ETHSVLKSIVHEDQDAHLQNSRLTYSDLCLQIPESKFRQCLLKTLAVLFKLICSYHEITS
FQLENEALECPSTNAKLMEDRTPGSSSLEESTRSTSSADISEGTYYGNVESHQPVSEGRN
GDGATSSSGSPWYHLRKEAIAVVSQTLLRGRKNLWQLTTSRVLVLLSSSAASTSIHQFLK
NYEDLNTFILAGEAFCGVEVVEFRKKLKGVCENYFSAFHQQNISALKMVLEKETWLILPP
EMMQIINFAGLVGDGVPFIAASDGNSSKPRVLHTDKSAKKIDRVAKKSGFSPWVRNGNPF
LLKLSGSAKEANDCTPLSGATSGGYEGNVHNLHVDIVSSCNGDVDRINCSNSISEEENED
LLADFIDEDSQLPSRISKPNFPRSRSLHFSNDEFTAQTGSSVCLLRSMDKYARLMQKLEI
VNVEFFKGICQLFEMFFYYLFEAFGQQNTGSSGKADSLTYRLKRALSRITADCDQWIKSP
SGSLSSTSAHADVTRTAPQSSNFGHAAGMSFGLKERCAGADTLALVSRILHRSRTHLQSL
LLKSNTAIVEDFFEHVVDSVPDLTEHIHRTTARVLLHINGYVDRIANAKWELKDLGMEHN
GYVDLLLGEFKHYKTRLAHGGIHKEVHDLLLDYGLEIIAEILIEGLSRVKRCTDEGRALM
SLDLQVLINGLQHFVSLNVKPKLQIVETFIKAYYLPETEYVHWARAHPEYSKNQIVGLIN
LVASMKGWKRKARLEVLEKIE
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgcagccgcagccgaatctgttccccttcggcagcgttttcggcaatcct
attctgttgaatgccggcattggcgatttaagcgacgctggatttgagagctctaggttt
ttcttcttggtcccgtttttattatttcaaggcggtggaatggatttatccaatgtgggg
gaaaaattcctcagctccgtacgttccgcccgatcgcttggtctcttgccttccgtttct
tcttctgaccgccccgaggttccagcccgagctgcagcagcagctgctattgctcgtgcc
cttgcaggattgccacctcatcagagatatagttttccctcggcttccgaagaactgagg
tcaatatatggaagcagacctcaaagtcaagtagttgaggagctggaggaagacttctat
gaagaggagtttgatccaataaaacacatcctggagaatattccttctgaagaaattgat
ctagaacattttgagaaacaggccactcttagattagcacaactggacatagtagcagaa
cagttatcccatcgtgtcatggagcatcatgaagtaatggtgaagggtatgaatttggtc
agggaattggagagagacttgaaggttgcaaatatcatctgcatgaatggaaggaggcat
ctaacctcatcgatgaatgaggtttcaagggaccttgttgtgaatactgattctaagaag
aagcaagctcttatggacttgcttctagtattggctgaacttcttcatgcacgggacatg
caagtatctcttgaatcccttgttcaggaaaataattactgcaaggcatttcaagtacta
tccgagtatctacaagtacttgatagtttctcagagctctcagttatacaagagatgagc
aatggtgttgagttttggctaggaagagctcttcaaaagctggattcactcttgttagga
gtgtgccaggagtttaaagaagaaggctatttaactgtggttgacgcatatgctttgcta
ggagatgtctctggtcttgctgaaaagatgcaaagttttttcatgcaagaagttatctca
gaaactcactctgttttgaagagtattgttcatgaggatcaagatgcacatttgcaaaat
agtagactcacctacagtgatctatgccttcagatacctgaatctaagtttaggcagtgt
ttattaaaaacactagctgtcttgttcaaattgatttgttcttatcatgaaatcacgagc
tttcagctggagaatgaggctttagagtgcccatcaacaaatgccaaattgatggaagac
aggacaccaggttcatcttccttagaggagtctacaagatccacttcctcagctgatatc
tctgaagggacttattatggaaatgtagaatcccatcaaccagtttctgagggtagaaat
ggtgatggtgcgacatcaagcagtggatctccatggtatcatctaaggaaagaagccata
gctgttgtatcacaaaccctgctgaggggacggaagaatctttggcaacttacaactagc
cgggtactagtactgctttcttcttctgctgcttctacaagcatacatcaatttttgaaa
aattatgaagatcttaacacattcatcttggctggggaagccttctgtggagttgaggta
gttgaattcaggaagaaattgaagggtgtttgtgaaaactatttttcagcatttcatcag
caaaatatatctgcacttaaaatggttttagagaaggaaacttggcttatattgccaccg
gagatgatgcaaataattaattttgctggtctagtaggtgacggggtaccttttattgct
gcatctgatggtaactcttctaagcctagggtgcttcacactgacaaatcagcaaaaaaa
attgacagagttgccaagaagagtggattttctccttgggttagaaatggaaatccattt
ttgctaaaactaagtggtagtgccaaagaagctaatgattgcaccccgcttagtggagca
acctctggtggatacgagggaaatgttcataatcttcatgttgatattgtctcttcctgc
aatggtgatgtagatcgtatcaactgctccaattctatatcagaagaggaaaatgaggat
ttacttgctgactttattgatgaagatagccaactccctagtcgaatatcaaaacccaac
tttccaagaagtcgctctttgcatttcagtaatgatgagtttacagcacaaactggatca
tctgtttgtcttctaaggtcaatggataaatatgcaaggttgatgcagaaacttgaaata
gtaaatgttgagttttttaagggcatatgccagttatttgagatgtttttctattattta
tttgaagcctttggtcagcaaaacacgggttcaagtggaaaggccgactctcttacttat
cggttaaagagagccttatcaagaataacagcggattgtgatcagtggatcaaaagtcca
tcaggatccttatcatctacatctgcacatgcagatgtgacacgtactgctcctcaaagt
tcaaattttggtcatgcagcaggcatgtcatttggtctaaaggaaagatgtgctggtgct
gatactttagcccttgtttctcgtatattgcatagatctagaactcatctccaatcattg
ctgcttaagagtaatacagctatagttgaagatttctttgaacacgtggtggattctgtt
ccagatcttacagaacacatacataggacaaccgcaagagtactgctccacattaacggg
tatgttgatcgaattgctaatgcaaaatgggaactgaaagaccttgggatggagcacaat
gggtatgtggatttgttgttaggagaatttaagcactataaaacaaggctcgctcatggg
ggaattcacaaggaggttcacgaccttctcttggactatgggcttgaaattattgcagaa
attcttattgaaggtctatcacgagtgaaaagatgtactgatgaaggacgagctctcatg
tcattagaccttcaggttttaatcaatggcttgcaacactttgtctccttgaatgtgaag
ccaaagttacagatcgttgaaactttcatcaaggcttattatctccctgaaactgaatat
gtacactgggcacgagctcatcctgaatacagcaagaatcaaattgtgggattgataaac
cttgttgcttcaatgaaaggttggaaaagaaaagccaggttggaagtgctagaaaagata
gaataa
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