Gossypium arboreum (tree cotton): 108455686
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Entry
108455686 CDS
T05776
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108455686
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108455686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
zf-PHD-like
Porphobil_deam
Motif
Other DBs
NCBI-GeneID:
108455686
NCBI-ProteinID:
XP_052874690
LinkDB
All DBs
Position
9:2115233..2127030
Genome browser
AA seq
1824 aa
AA seq
DB search
MSNPSSSSWVSDQPGQRLMDMAHCGIGLTNTIHSEVAQCLPLPSLPVFCGASDLELRLFD
DPAVGASRSLNRPQIIAQAGRIADLLRETDVSYLNLRDEAGSVSHDHLEPLELHAQVLQY
NPAAFEYVTPGLVKGKNSGGAMFERKPSESSAPLIGQFQRETRSNRNKQTDVVANDMPKS
SSKKPKIKKKADDTGSSVLPDPTELQDAIIGNFRELLEDFCSRAQIPTDDRDEMEWLSLP
VNDVRMLVNEIMSVRAKRLLHLVPVDILVKLLRVLDHQIHRAEGLSIDECEHQDSDVFSL
VFCALESIHASLAIMAHNDMPKQLYHEEIIERILEFSRHQITDVMSAYDPSYRALHKPSE
NGAVEDDDDEEPDAELGSASKKRRSTKTAKAKKSALNKVSGAVNAILQKLCTILGLLKDL
LLIEKLSDSCVLQLLKTSFTTFLVDNIQLLQLKAIGLLTGIFYSYTQHRTYIIDEMVQLL
WKLPVSKRALRAYHLPDEEQRQIQMITALLIQLVHSSANLPEALKQTSIGSPILEVSVDA
GYLTKCHESVQDTCCHFWTRVLQRLASVKTQEASELKLMIENLVTDLLTTLNLPEYPAAA
PILEVLCVLLLQNAGLKSKDTSVRAMAIDLLGTIAARLKHDALLNRKDKFWISEELLSGD
DTDRSYPKGACSICFDGKEEKVLYRCQGCQRFFHSDCMGVREQEGPNRSWYCQFCMCKKQ
LLVLQSYCESQYKDNEKPKRGRSESSKSSDPITKVEIIQQMLLNHLQDTASADDVHLFVR
WCYLCLWYKDGPKSQQNFKYYVSRLRSKAIVRDSGTVSSLFLRDSVKKIALALGQNNSFS
RGFDKILYLLLVSLRENSPVIRAKALRAVSIIVEVDPEVLGDKRVQVAVEGRFCDSAISV
REAALELVGRHIASHPDVSLKYFEKVAERIKDTGVSVRKRAIKIIRDMCNADPNFSGFTN
ACIEIISRVSDDESSIQDLVCKTFYEFWFEEPSGMQTQYPGDGSSIPLEVAKKTEQIVET
LRQLPNHQFLVTVIKRNLVLDFFPQSAKAAGINPVSLAAVRRRCEVMCKCLLERILQTEE
TSNVEAEVPTLPYVLALHAFCVVDPSLCMPASDPSQFVITLQPYLKSQVDNRVGAQLLES
IIFVIDAVVPLMRKLPPSVGDELKQDLKHMIVRHSFLTVVHACIKCLCSVSRKAGNTGDV
VEYLIQLFFKLLDSRATDNKQQVGRSLFCLGLLIRYGNSLFGGSSSKNIDVASSISLFKK
YLQMDDFSIKVRSLQALGFALIARPEYMLEKDIGKILEAALAASSNVRLKMQMLQNLLEY
LLDAESQMETDKVSDDQVQYTVEGGHSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNE
EVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLDVNQKLAHHLLMNMNEKYPAFFES
RLGDGLQLSFIFMRSISGNALENPNEKSQSKLPGNLKGKSDAGSLTQARLGVSRIYKLIR
GNRVARNKFMSSIVRKFDNPSWNDSVIPFLMYCTETLALLPFSSPDEPLYLIYAINRVIQ
VRAGALEANLKILSSNLLQTDAQMMTSNNGIVQPDYSQAAYNHMATLDLNGTFQEPPVVQ
PPFFHMTSIDLNGTIQQNFSYQSISDYPPAIETTMHKMAPSEPRSLSKDEIQKIQADVLA
ATALQLLMKLKRHLKIVYSLNDQRCQAFSPTEPIKPGDVLTRQNVPFDIGETQTTLPSTY
QELVQRYQEYKNALREDAIDYSTFTANIKRKRPTPRKGGKAVRTTGGGDEDDDYDEEWTG
GSGVRRMSNSGRKSYNIRSSSRQR
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccaagtagctcgtcctgggtctcggatcaaccggggcagaggttaatggac
atggcccactgtggcatcggcttgaccaacaccatccactctgaggtggcgcagtgcttg
ccgcttccttcgttgcctgttttctgtggtgcttcggatctggagctccggctgtttgac
gacccggctgttggagcttccaggtctttgaaccgaccgcaaattatagctcaggctggt
cgaattgctgatctgcttcgcgaaactgacgtttcatatctgaatcttagggatgaggca
ggttcagtttcgcatgaccatttggagcccttggaacttcatgcacaagttctccaatac
aaccctgcagcatttgagtatgttacccctggtcttgtcaagggaaaaaactctggtggt
gctatgtttgaaaggaagccatctgagtcaagtgctcctcttattggtcaattccaaaga
gagactcgcagcaatcgcaataagcagactgatgttgttgctaatgatatgccaaaatcg
tcttccaagaagccaaaaatcaagaaaaaggctgatgacactgggtcatcagttctacct
gatcctacagagcttcaagatgctataattgggaacttccgtgagctgctagaagacttc
tgcagcagagctcaaattcctactgatgatagggatgagatggagtggttatcattgcca
gttaatgatgttagaatgcttgtaaatgaaattatgtcagtacgtgcaaagagacttcta
catttggttcctgtagatattcttgtgaaattgttacgggttctagatcatcagatacat
cgggcagaaggcttgtctattgatgaatgtgaacatcaagactcagatgtattctcatta
gtattctgtgccctggagtccattcatgcttctttggcaataatggcacataatgacatg
ccaaagcaattataccatgaagagattattgaaaggattttagagttctctaggcaccag
ataacagatgttatgtcagcttatgacccatcatatcgtgccttgcataaaccaagtgaa
aatggagcagttgaagatgatgatgatgaggagcctgatgctgaactggggtctgctagc
aagaaaagacggagtaccaagactgctaaagcaaagaaatcagcgttaaataaggtctct
ggtgctgtgaatgctatactacaaaagctctgcacaattcttggtttactcaaagacttg
ttgttgattgagaagttatctgatagttgtgttctacaactattaaagacaagcttcact
acttttttggtggacaacattcagctcttgcaactcaaagcaattggcttgctaactggg
atattctactcatatacccaacatagaacatatataatagatgaaatggttcagcttctc
tggaagttgcctgtttcaaagcgagcattaagagcgtatcacctacctgatgaagaacag
aggcagatccagatgattacagctttgctgattcagttggttcatagcagtgctaacctt
cctgaagctttaaagcaaacatcaattggaagtcccatcttggaagtgtcagttgatgct
ggttatttaactaaatgccatgaatctgttcaggatacatgttgtcatttctggactcgt
gtccttcaacgtcttgcttctgtaaagactcaagaggcctctgagttgaaactgatgatt
gagaatcttgtcactgatttactgacaacattaaatctacctgaataccctgctgctgct
cctattttagaggttctttgtgttttactgctccaaaatgcaggtctgaaatctaaggat
acctctgttcgtgcaatggcaattgatcttctgggcacaatagcagcaaggttgaagcat
gatgctctcctcaataggaaggacaagttctggatatcggaagaattgcttagtggggat
gatactgatcgtagttacccaaaaggtgcatgttccatttgttttgatggaaaggaagag
aaagtgttatataggtgtcaaggttgtcaaagatttttccacagtgattgtatgggggta
agagaacaagaaggtcctaaccgtagttggtactgccagttttgcatgtgtaagaagcag
cttcttgtattgcaatcatactgtgaatcgcagtacaaggataatgagaaaccgaaacgt
ggtcgctcagaaagttctaaatcttctgatccaattacgaaagttgaaattattcagcag
atgcttttgaatcatcttcaagatactgcttctgctgatgatgtccatctttttgttcga
tggtgttatctttgcttatggtataaagatggcccgaaatctcaacaaaatttcaagtac
tatgtttctagactgagatcaaaagcaatagtgcgtgattcggggactgtttcttcactg
tttttaagggattcagtcaagaaaattgctttagcactgggacaaaataattctttctct
agaggatttgacaagattctttacttgcttctggttagcttaagagaaaactcccctgtg
attagggccaaggctttacgagcagttagtattattgtagaagttgatccagaggtatta
ggtgacaaacgtgttcaagtggctgttgagggaaggttttgtgactctgcaatatctgtc
agggaagctgcattggaactagttggcaggcacattgcttcacatccagatgttagttta
aagtactttgagaaggtagcagagaggattaaagatactggagtcagcgtacggaaacga
gcaatcaaaattattcgagatatgtgcaatgcggatcctaacttctcagggtttacaaat
gcttgcattgagattatttctcgtgttagtgatgatgaatcaagtattcaggatcttgtt
tgtaagacattttatgagttctggtttgaagaaccttctggaatgcagactcagtatcct
ggagatggtagttccattcctttggaggtggctaagaagactgaacagattgttgaaaca
ctgaggcagttgcctaatcatcagtttcttgtaactgtcattaagcgtaacttggtcctt
gattttttccctcaatcagcgaaagctgctggaatcaaccctgtctcccttgctgcggta
cgcaggcgatgtgaagtgatgtgcaagtgcttattggaaagaatattgcagacagaagaa
acaagtaatgtggaagcagaagttcctacactcccctatgttttggccttgcacgcattt
tgtgttgtggacccatcactttgcatgccagcttcagatccttcccaatttgttatcacg
ctacagccttaccttaagagtcaggttgataacagagttggtgcacagttactggagagt
ataatctttgtaattgatgccgttgtgccgttgatgcgaaagttgcctcctagtgttggt
gatgaactaaaacaagatctgaagcacatgatcgtccggcattcctttttgactgttgtc
cacgcttgcatcaagtgtctttgttcagtgagtagaaaggcagggaatactggtgatgtt
gttgagtatctcattcagttatttttcaaactattggattcccgagcaactgataacaag
cagcaagtggggcgctctctcttctgtcttggattacttatccgctatggaaattctttg
tttggtggttctagtagcaaaaatattgatgttgctagcagtattagtttgtttaaaaag
tatcttcaaatggatgattttagcataaaggttagatctttgcaggcattaggtttcgct
ctaattgctaggcctgaatatatgttggaaaaggacattggaaagattttagaggcagca
ttagcagcgagttctaatgttcgtcttaagatgcaaatgttacaaaatttgttggaatat
cttcttgatgcggaaagtcaaatggaaacggataaagtgagtgatgatcaagttcagtat
actgtagaaggtggccacagtgtccctgtagctgcgggtgctggcgatactaacatttgt
gggggtatagtccagctgtattgggataatattctggggagatgcctggactttaacgaa
gaagttcgccaatccgccctaaagatagtggaagtagttcttcgacaaggacttgttcat
cctattacttgtgtcccataccttatagccctagaaacggatcctctggacgtcaaccaa
aagttggctcatcatttgctaatgaatatgaatgagaaatatcctgcttttttcgagagc
cgactgggggatgggcttcagctgtcatttatcttcatgcgctcaattagtggcaatgca
cttgaaaatccaaatgaaaaatcccaatcaaagcttcctggaaatttgaaagggaaatct
gatgctggttctttaacacaagcaaggctgggagtttctagaatttacaagctaattcgt
ggaaatcgggttgctaggaacaaattcatgtcctcaattgtgcgcaaatttgataatcct
agctggaacgattccgttatacctttcttgatgtattgtacggaaactcttgctttgtta
ccattttcatctcctgatgaaccactttatttgatctacgccataaatcgagtgatacaa
gtcagagcaggggctcttgaggcaaatttgaaaatcttgagttcaaatttgctgcaaaca
gatgctcagatgatgactagtaataacgggatagttcagccggattatagtcaagctgct
tataatcatatggctacgctagatttgaacggaacatttcaggagccgcctgtggttcag
cctcctttctttcacatgacatcaatcgatttgaatggtacaatccagcaaaacttcagt
tatcagtctatttcagattatcctcctgcaattgagacaacaatgcataagatggcccct
tctgaacctcgttctctttccaaagatgaaattcaaaaaatccaggctgacgttcttgct
gctactgcattacagcttcttatgaagctaaaaagacatctaaaaattgtttatagcctg
aatgatcaaagatgccaggccttttctccaactgaacccataaagccgggggatgttcta
acgaggcagaacgttccctttgacatcggtgaaacacagacaaccttgcctagcacctat
caagaattggtgcagagatatcaggaatacaaaaatgcgttgagggaagatgcaatcgat
tactcaacattcacagccaacatcaaaaggaagcgaccaactccgaggaaaggaggaaaa
gcggtgcgaacgaccggtggtggggatgaagacgatgattacgatgaagagtggacaggt
gggagtggtgttcgtcggatgagtaacagcggacggaaaagttacaacataagaagcagc
agtcggcagcgatag
DBGET
integrated database retrieval system
