Gossypium arboreum (tree cotton): 108455837
Help
Entry
108455837 CDS
T05776
Name
(RefSeq) heat stress transcription factor A-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108455837
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108455837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CCDC85
YwqH-like
DUF4164
Motif
Other DBs
NCBI-GeneID:
108455837
NCBI-ProteinID:
XP_052874591
LinkDB
All DBs
Position
9:77509952..77513128
Genome browser
AA seq
511 aa
AA seq
DB search
MNPDEEKRSQNALPNPPQTSPFSSSLMELETFSCGVPQPLEILQGNPVPPFLSKTFDLVE
DTSLDPIISWGPTGESFVVWDPVEFSKFILPRNFKHNNFSSFVRQLNTYVGLICKLEPFR
EQSRFSHLFLNHLVYCFQGFRKIDTDKWEFANEAFQRGKRYLLKNIQRRKSPQSQQFGNY
FGSSTEAGRSGVEGEIERLRKEKSMLMQEVVELQQEQQGTARHVEVVNQRLQSAEQRQKQ
MVSFLAKLFQNPAFLARLRQKKEQGEISSSRMRRKFVKHQLVELIDSETPAEGQIVKYSK
LDWRDIAISPSAPDIIPTSVEQSPDYLPKGVAETDLGSEGFPFPVDDEVVVSDELATAHG
FLGTPELVGEGSSGTGIQDLKGKNVIGSEQVVNPGYFISSPEDLVKQKSTPYFSSPISES
VSKQDVWSMDFDATVGMPSSRNELWGNLETYDIPELGVTGELSDVWDLGFLQAAEDSGAD
KWPTEGYPFDNPHTENQGGQSEANRSKKMDP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagacgaagaaaaacgctctcagaatgcccttccaaacccaccccaaacgtcg
cccttctcttcctcattaatggaactggaaacgttttcatgtggcgtgcctcagcctttg
gaaattcttcaggggaatccagtgccgccatttttgtcgaaaacgttcgatttggtggag
gacacgtcgttggatccgatcatctcttggggtccgacgggagagagcttcgtggtttgg
gacccggtcgaattctctaagttcatacttcctcggaatttcaagcacaacaatttctcc
agctttgttcgtcagctcaatacttatgtgggtttaatctgtaaactggaaccttttcgt
gaacaatcccgtttctcccatttattcttgaatcatcttgtgtactgttttcagggattt
cgcaaaatcgatactgataagtgggaatttgcaaacgaggcttttcagcgagggaagagg
tatcttttgaagaatattcagaggcgtaagtcgcctcaatcgcaacagtttggtaactat
tttggatcttctactgaagcagggaggtctggagtggaaggtgaaatagaaaggttgagg
aaggagaagagcatgttaatgcaggaagtagtggaactgcagcaggagcagcagggtacg
gctcggcatgtcgaagtagtgaatcagaggcttcaatcagctgaacaaaggcagaagcaa
atggtttctttcttagccaagttattccagaatccggctttcttggcacgccttagacaa
aaaaaggaacagggagaaatcagttcttcgaggatgcggaggaagtttgtcaagcaccag
ctggttgaattgatcgattcagaaacacctgctgaaggccagattgtgaagtactccaaa
cttgattggagagacatcgctatatccccttcagccccagatataattccaacttctgtt
gaacaatctccagattatctacccaagggagtagcagaaaccgatttaggttctgaaggc
tttccatttccagttgatgatgaagtagttgtatctgatgagttggcaactgcacatgga
tttcttggaaccccagagctggtaggagaaggttcatcaggcacgggaatccaagatctg
aaagggaagaatgtaatcggttcggaacaagtggttaatccagggtattttatatcttcc
ccagaggatttagtgaagcagaaaagcaccccatatttctcatctcctatcagtgagagc
gtttctaaacaagatgtatggagcatggattttgatgctactgttggtatgcctagttct
aggaacgagttatggggtaatcttgaaacctatgacattcccgagttgggggtaactggt
gagttatctgatgtctgggatctggggtttttgcaagcagcagaagattcaggtgctgat
aaatggccgactgagggatatcctttcgacaatccccatactgagaatcaaggtggccag
tcagaagctaataggtctaagaaaatggatccataa
DBGET
integrated database retrieval system
