Gossypium arboreum (tree cotton): 108455842
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Entry
108455842 CDS
T05776
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108455842
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108455842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_Aladin
Cytochrom_D1
PEP5_VPS11_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
108455842
NCBI-ProteinID:
XP_017609895
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Position
7:complement(14598762..14603317)
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AA seq
522 aa
AA seq
DB search
MGAKKENNDDEMDEKVKKYLRGEAANLEGLKDKKLKGQLAVREDLYGKSAKTAAKIEKWL
LPSEGGYLEAEGIEKTWRIKQESIAREIDISSSKNQYDIVLPELGPYTLDFTSNGRYMAA
AGRKGHLAIVDMKTLNLIKEIQVKETVRDVVYLHNELFFAVAQKKYPYIYNRDGTELHCL
KEHGAVLRLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNFRTGLGRTDVMQVNPFNGVV
ALGHSSGTVTMWKPTSSVPLVKMLCHPGPVSSLAFHPNGHLMATSGKENKIKIWDLRKFE
VIQTMPGHAKTLNFSQKGLLAAGTGSFIKILADFSGSQNYNSYMTHSMAKGYQVGKVLFR
PYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIML
DPTKVGTVRAPQKKEKPTKKEIEAEMEAAIETAKDTDFKKKTKGRNKPSKRAKKRQEMIE
RAKKPFLEQQIQEHERSRKKQKTNPETEMPKSLQRFVRQKAA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctaaaaaggagaataacgatgatgagatggacgaaaaagtgaagaagtatctt
agaggagaagctgcaaatttggagggattaaaggacaagaaactaaagggccagcttgct
gtaagagaagatttgtatggaaaatctgcgaaaactgctgccaagattgagaaatggctt
ttgccaagtgagggtggttatttggaggcagaaggtattgagaagacatggaggatcaag
caagaatccattgctcgtgagattgatatctcaagctcgaagaaccagtatgatattgtt
ttaccagaacttggtccttacactctagatttcacctcaaatggtcggtatatggcagcc
gctggacgtaagggccatctggctattgttgatatgaagacattaaacctaattaaggag
attcaggttaaagaaacagtacgggatgtagtgtacttgcataatgaactcttttttgct
gttgctcagaaaaagtacccttatatttataatcgtgatggaactgagctccattgttta
aaggaacacggtgcagtactaagactccagtttctgaaaaaccactttctcttggcatca
ataaacaaatttgggcagcttcattatcaggatgttacaatgggtgagatggtaggcaat
ttccggactggtttaggccgcactgatgttatgcaggtcaatccatttaacggagttgtt
gcattgggtcattctagtggtacagtaaccatgtggaagcccaccagttctgtcccactt
gtaaagatgctatgccatcctggacctgtctcatcattggcgttccatccaaatgggcat
ctcatggctacatctgggaaagaaaataaaatcaagatttgggacttgaggaagtttgag
gttattcaaacaatgccaggtcatgcaaagaccttgaatttcagtcagaaaggcttgctt
gctgccggaactggatcatttataaaaattttagctgatttttctggatctcagaattat
aatagttatatgactcattctatggctaaaggttaccaggtagggaaagttttgtttcga
ccgtatgaagatgttttggggataggacactccatgggttggtctagtattcttattcca
ggatccggggaacccaactttgattcttgggtggcaaacccattcgaaacatctaaacag
aggcgagagaaggaagtgcactctctgctcgacaagcttccacccgaaacaataatgttg
gacccaaccaaggttggtacagtgagagcaccacaaaagaaagagaagccaacgaagaag
gagatagaagctgaaatggaagctgccattgaaactgcaaaggataccgactttaaaaag
aaaacaaagggaaggaacaagccgagtaagagagcaaagaagagacaagagatgattgaa
agagccaagaaaccgttcttggaacaacaaatacaggaacatgaaaggtctagaaagaag
cagaaaaccaatccggaaactgaaatgccgaaaagtttacagcggtttgttcgtcagaaa
gcagcttaa
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