Gossypium arboreum (tree cotton): 108455943
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Entry
108455943 CDS
T05776
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108455943
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108455943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR75_1st
eIF2A
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
108455943
NCBI-ProteinID:
XP_017610015
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Position
9:complement(64038373..64043281)
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AA seq
769 aa
AA seq
DB search
MAKRGYKLQEIVAHTANVNCLSIGKKTFKLLITGGDDHKVYVWAIGKTTSLMSLCGHSSP
VESLVFDSGEVSVLAGASAGAIKLWDLEETKMVRGFTGHRSNCTAMDFHPFGEFFASGSM
DKSLKIWDIRKKGCIHTYKSHTRGISSIRFSPDGRWVVSGGFDNVVKVWDLTAGKLLNEF
KFHEGHIRSINFHPLEFLLATGSADRTVKFWDLETFELIGSSKPEAKGARSVTFHPDGKT
LFCGSDDGFKVYSWEPIVCHNSADMGWSTLGDLCINKGKLLGCSYYRNSVGVWIADIAHI
VPFGQKDHMEKAGNFMRSTLGSRPLSPDYETKEIKNIYVDTAGGYSVVMQKAVFLKSPKP
VLPLNANEKDQAAENQSPGAGLNIKSNGQSGDKSVTKPSVVLQDVDNFSGTKSGMLLKPG
HVRRLSFNNLEVEKLSAAVEPGTPSDMKTGLDSAIDLDSETRTSPNQDILAVVRGRTRSL
VERFERQEKLNSGRDLASDNGNCAGNRSSRMESTCSSKGSITGDQISSHASSGIVTTISI
KESTYASDGIISNQFSQREATSATITENHIPLRGLNSSNDENFSIIESQVPKGEPSSATD
GSITDNVMQTHDIFVSTLRSRLTKLQVVRLFWEKNDIKGAIDALRKLPDHSVQVDSVSVF
MQKMEILTLDLFSSLLPVLTGLLDSKIERHVIVSLEMLLKLVAVFGPVIRLTALAPRSVS
VDLHGEQRRECCNQCSMQLEKIHKLLPLLQRRGGTIARCAHELNLVLQE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtggatataagctgcaggaaattgtggctcatacagcaaacgtgaattgt
ttaagtataggaaaaaagacatttaaacttcttattacaggtggagatgatcataaagta
tatgtttgggcaattgggaaaaccacctctttaatgagtctttgtggtcattctagtccg
gttgaatcgttagttttcgattccggggaagtttcggtgcttgctggagcatctgcgggt
gcgataaagctttgggatctcgaagaaactaagatggttcgcggatttactggacacaga
tctaattgcactgccatggatttccatccatttggtgagttctttgcttctggttccatg
gacaaaagtctaaagatatgggatattagaaagaaggggtgcattcatacatacaagagc
catactcgaggcattagctcgattagattctctcctgatggccgctgggtagtttcgggt
ggattcgataatgttgtaaaggtgtgggatcttactgccgggaaactcttgaatgagttc
aagtttcacgaaggacatattcgttccatcaacttccatcctcttgagtttctccttgcc
acaggttcagcagatagaacagtgaaattctgggatttagagacctttgaactgattgga
tcttccaaacctgaggctaaaggggctcggtcagttacctttcaccctgatgggaaaacc
cttttctgtggatcagatgatggttttaaggtttactcatgggagccaatagtttgtcat
aattctgctgatatgggatggtcgacactcggtgacctctgcataaataaaggcaaactt
ttgggttgttcgtattatcgaaattcggtcggagtttggatagcagatatagcgcatatt
gtgccatttggacaaaaagatcatatggagaaagcagggaatttcatgaggtcaactttg
ggatcacggcccttatcgcctgattacgagacaaaggaaattaagaacatatatgttgac
actgctggtggttactccgttgttatgcaaaaagctgtctttttgaaatctccgaaaccg
gtactgccattgaatgccaatgaaaaagatcaggcagcagagaaccagagtcctggagca
ggacttaatattaaatccaatggacaatcgggtgacaagtctgttaccaagccgagtgtt
gttctgcaggatgtcgataacttttcagggacaaaatcaggcatgttgctcaaaccaggt
catgttagaagactatctttcaacaatttagaggttgaaaagctgtcagctgcagttgaa
cccggaactcctagtgatatgaaaaccgggttagatagtgcaattgatctggattctgaa
actaggacatcccctaatcaagatattttggcggttgtccgagggcgaacacgcagtttg
gttgagaggtttgaacgacaagaaaaattaaatagcggtcgtgatcttgcaagtgataat
gggaactgtgccggaaatcgaagttctagaatggaatcaacttgtagctctaagggtagc
attactggagatcaaatttctagccatgcatctagtggcatcgttactaccatttctata
aaggaatcaacatatgcttcggatgggatcatttcaaatcaattttctcaaagggaagca
acctctgctacaatcactgaaaatcacattcctttgagaggattgaattcttctaatgat
gagaatttcagtattattgaaagccaagttccaaagggtgaaccgagctctgctaccgat
ggcagcataactgataacgtgatgcaaacacacgacatattcgtaagcactctccggtca
cgcttgacaaagttacaggtcgtgcggcttttttgggaaaagaatgatatcaaaggtgca
atcgatgccttacggaagctgccagaccattctgtgcaagtagattcggtcagtgttttc
atgcaaaaaatggagattctcaccttagatctgttctccagcctacttccggtgcttacc
ggcttattagatagcaaaatcgaaaggcacgtaattgtctcgttggagatgctactgaag
cttgtagcagtttttggtcctgtgatacgcttaactgctttggctccacgcagtgtcagt
gttgatcttcacggcgagcaaaggcgagaatgctgcaaccaatgttccatgcaactggag
aagattcacaaacttctcccactgctccaaaggagaggtggtaccatagctcgatgtgca
cacgaactgaatctagttcttcaagaatga
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