Gossypium arboreum (tree cotton): 108456060
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Entry
108456060 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108456060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108456060
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108456060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
108456060
NCBI-ProteinID:
XP_017610144
LinkDB
All DBs
Position
1:complement(112858819..112868149)
Genome browser
AA seq
1494 aa
AA seq
DB search
MSWVEEVVLRDVTNAGLVVSDRIGREVAAQLDLEEALEASRYASHPYSTHPREWPPLIEV
EDTWELPLVLIERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYNVE
EQAICAVGLAKSRPGIFIEAIQYLLILATPVELILVGVCCSGGGDNSDPYAEVSLQPLPE
YAIPSDGVTMTCISCTDKGRIFMAGRDGHIYELHYTTGSGWHKRCRKVCLTAGVGSVISR
WVIPNMFKFGAVDPIVEMVVDNERQILYARTEEMKIQVFVMGPSGDSPLKKVAEERNLLN
QKDAHYGGRQTTASRASNRSAKPSIVSISPLSTLESKWLHLVAILSDGRRMYLSTSTSSG
SNSTVGGLGGFNNHHHRPSCLKVVTTRPSPPLGVSGGLTFGAMSLAGRTQTEDLSLKVET
AYYSTGTLVLSDSSPPTMSSLLIVSRDSSSQSSLSGNLGASARSSRALRESVSSLPVEGR
MLFVADVLPLPDTAATVLSLYSELEFCGSESSVESCEKASGKLWARGDLSTQHILPRRRI
VIFSTMGMMEVVFNRPVDILRRLLESNSPRPILEDFFNRFGAGEAAAMCLMLAARIVHSE
NLISNVVAEKAAEAFEDPRIVGVPQVEGTGGLSNTRTAAGGFSMGQVVQEAEPVFSGAHE
GLCLCSSRLLFPVWELPVMVVKGGYDATSENGLIACRLSVGAMQVLENKTRALEIFLRSR
RNKRRGLYGCVAGLGDMTGSILYGTGSELGASDRSMVRNLFGAYFRSVESNGGGTSNKRQ
RLPYSPAELAAMEVRAMECIRQLLLRSAEALFLLQLVSQHHVTRLVQGFDANIRQELVQL
TFHQLVCSEEGDRLATRLISALMEYYTGPDGRGTVDDISGKLREGCPSYFKESDYKFFLA
VECLERAAVTPDPDVKENLAREAFDFLSKVPESADLITVCKRFEDLRFYEAVVRLPLQKA
QALDPAGDAFNEQIDQAIRDYAIAQREQCYEIIASALRSLKGEGSQSEFGSPARPVAVRS
VLDHASRRKYICQIVQLSVQSPDRLFHEYLYRTMIDLGLENELLEYGGPDLVPFLQTAGC
EPAQEVRALSALTSATPSVGQPGASIHSNQAKYFDLLARYYVLKRQHLLAAHVLLRLAER
RSIDGSNAPSLEQRCQYLSNAVLQAKSASNNDGLVASNRGAFDSGLLDLLEGKLAVLQFQ
IKVKEELEAMATRLEATPGTSESVQNGSAADSRFNGDANLANAAREKAKELSSDLKSITQ
LYNEYAVPFELWEICLEMLYFANYSGDADSSIIRETWARLIDQALLSGGVAEACSVLKRV
GSKVYPGDGAVLPLDTLCLHLEKAALERVESGTESVGDEDVARALLAACKGAAEPSLNTY
DQLLSNGAILSSPNLRLRLLQSMLVVLREWAMSVFAQRMGTTAAGASLILGGAFSPEQTM
VLNQGIRDKITSAANRYMTEVRRLPLPQSRTEAVYRGFRELEESLIAPFSFDRF
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggtggaggaggttgtattgcgtgatgtcaccaatgcgggactcgtcgttagc
gaccgtattggccgtgaagtggcggctcagttggaccttgaggaagctttggaagcttcc
agatacgccagtcatccctactccacacaccccagagagtggcctcctttgatcgaggtg
gaagatacttgggagctacctctggtactcatagaaagatataatgcagctggtggagaa
ggaactgcattatgtggaatatttccggagatacgtagggcgtgggcatctgtggataat
tctttgtttctttggcgttttgacaaatgggatggccaatgccctgaatacaatgtggag
gaacaagctatatgtgctgttggcctcgccaaatctagacctggcattttcattgaagct
atacagtatcttttaatattagcaactcctgtcgagttgattcttgtaggagtatgctgc
tctggagggggtgataatagtgatccatatgcagaggtttcactgcagcctttgccagag
tatgcaataccttctgacggagttactatgacttgtatctcttgtactgataagggtcgt
attttcatggctggccgagatggccacatatatgagctgcattacacgactggttcaggc
tggcataagcgttgtcggaaagtttgcctcactgcaggtgtagggagtgttatttcaagg
tgggttataccaaatatgtttaagtttggagctgtagatcccattgttgaaatggttgtt
gataacgaaaggcagattctatatgcaagaactgaagagatgaaaattcaggtttttgtt
atggggccaagtggagacagtccattgaaaaaagtggctgaagaaaggaatttgttaaat
cagaaagatgcacattatggaggtagacaaacaacagcatcaagagcgtcaaatcgatca
gcaaaaccatccattgtttcaatttcccctttatccacgttggaatcaaagtggctgcat
cttgttgctattttatcagatggtaggcgaatgtacctttctacctccacatctagtgga
agtaatagtactgttggaggtttgggtggatttaacaatcatcaccacaggccaagctgt
ttaaaagttgtaacaactaggccttcacctcctttaggcgtcagtggtggacttaccttt
ggcgcaatgtctttggctggtaggactcagactgaggatctttcactgaaggtagaaaca
gcgtactattctactggaactcttgtcctttctgattcttcaccgccaaccatgtcttcg
cttctcattgtgagcagagattcaagctcacagtcatctctgtcaggtaatttaggagca
agtgctcggagttcccgagcattacgagaatctgtttcttccttgcccgttgaaggccga
atgctctttgtggcagatgttcttcctttaccagatacagctgccactgtgttatcgctg
tattccgagcttgaattttgtggatctgaaagctcagttgagtcttgtgaaaaagcatca
gggaagttgtgggctagaggtgacctttcaactcaacatatattgccaaggaggagaatt
gttattttcagtaccatgggcatgatggaagtagttttcaatcggcccgttgatattctg
agaagattgttggagtcaaactctccaagaccaatcttagaggatttctttaatcgtttt
ggtgctggtgaagcagctgcaatgtgtttgatgctagctgcaaggatagttcattctgaa
aatcttataagcaatgttgttgctgaaaaggcagctgaagcatttgaggacccaagaatt
gttggagtgccacaagttgaaggtaccggtggactatcaaatactagaactgctgctggg
ggtttcagcatggggcaggttgttcaggaggctgagccagtgttctcaggtgctcatgaa
gggctctgcctgtgctcatcaaggttgctatttcctgtttgggagctccctgttatggtt
gtgaaaggtggttatgatgcaacatcggaaaatgggttgattgcatgcagactttctgtt
ggggctatgcaagtccttgagaacaagactcgtgctttggagatattcttaaggtctaga
aggaacaaaagaagagggctttatggatgtgtagctggtttaggtgacatgactggttct
attctctatggaactggttcagaattaggtgctagtgataggagcatggttagaaactta
tttggtgcttatttccggagtgtggagtctaatggtggtggaacgtccaataaaagacag
cggttaccatatagtcccgctgaattggctgctatggaggtgagggcgatggaatgcatc
cggcagttgcttcttaggtctgctgaagctctgtttttactacagcttgtttctcagcat
catgtaacacgcttggttcagggatttgatgctaacatccgccaggaattggttcagttg
acattccatcaacttgtttgttctgaggagggtgaccgccttgctacaagacttatttct
gctttgatggagtattatactggccctgatggcagggggacagtggatgatataagtggt
aaattacgtgagggatgtccaagctatttcaaggagtctgattataagtttttcttagct
gtggaatgtcttgaaagagctgctgtaactcctgatcctgatgtgaaggaaaatcttgcc
agggaagcctttgatttcctaagtaaagttccagaatctgctgatttaataactgtttgc
aaacggtttgaggacttaagattttatgaggctgtggttcgcttgcccctacagaaagct
caggcacttgatcctgcaggtgatgctttcaatgaacaaattgatcaagcaatcagagat
tatgcaattgctcagcgtgaacagtgctatgagataattgctagtgctttacgttctctg
aaaggtgagggctcacagagcgaatttgggtctcctgctaggcctgttgcagtgcgatct
gtccttgatcatgcttcacgaagaaaatatatatgccagattgttcagcttagtgttcaa
tcacctgacagattgtttcatgagtacttgtacagaactatgattgatttaggtcttgag
aatgagctgttggaatatgggggtcctgatttggtgccttttctgcagactgctggttgt
gaacctgcacaagaggttcgagctctctctgcattgacatcagcaactccttcagtgggt
caacctggagcttctattcattctaatcaagctaaatactttgatcttttggctcgatat
tatgtcttgaagcgacagcatttgcttgcagctcatgtattgttgaggctggctgaaaga
cgctcaattgatgggagcaatgctcctagtcttgaacagaggtgtcaatacctaagtaat
gctgttcttcaggccaagagtgctagtaacaatgatggtctggtagcttctaaccggggt
gcttttgacagtggattgctggacttactagaagggaaacttgctgttcttcagtttcag
ataaaagtaaaagaggaactggaggcaatggctaccaggttagaagctacacctggtaca
tcagaatctgttcaaaatggatctgctgctgatagcaggtttaatggtgatgccaattta
gcaaatgctgcacgagagaaggccaaggagttatcttcagatttgaagagcattactcag
ttgtataatgaatatgcagttccttttgaactttgggagatatgcctggaaatgttgtac
ttcgcaaactattcaggtgatgctgatagtagcattatccgagaaacttgggctagactt
attgatcaagctcttttaagcggtggagttgctgaggcttgctccgttttgaagcgggtt
ggttctaaagtttatccgggagatggagctgtattacctctggatactctatgccttcat
ctagagaaggctgcattggagagggtggaatctggaactgaatctgttggggatgaagat
gtggcaagggctcttctggctgcttgcaagggtgcagctgaaccttctttgaacacttac
gatcaactattatcaaatggggctattttgtcatcaccgaatctcagattacgccttctt
caatcaatgctagtggtacttcgcgaatgggcaatgtctgtatttgcacagaggatgggc
acgactgctgctggtgcttctttaatattaggtggagcattctcgccagaacaaacaatg
gttctaaaccaggggattcgggacaagatcactagtgcagcaaacaggtacatgacggag
gtgaggagattgccacttccacagagtcggactgaggctgtttatagaggatttcgggaa
cttgaagaatctttaattgccccattttcttttgaccgattttga
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integrated database retrieval system
