Gossypium arboreum (tree cotton): 108456648
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Entry
108456648 CDS
T05776
Name
(RefSeq) protein argonaute 1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108456648
03036 Chromosome and associated proteins [BR:
gab03036
]
108456648
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108456648
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108456648
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108456648
microRNA pathway
RISC loading complex
108456648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Gly-rich_Ago1
ArgoMid
Sas-6_C_CC
Motif
Other DBs
NCBI-GeneID:
108456648
NCBI-ProteinID:
XP_017610698
LinkDB
All DBs
Position
9:81613300..81624101
Genome browser
AA seq
1053 aa
AA seq
DB search
MVRKKRTDVPSAGGESSHSHDTGVGSGRATQRPSQQGGAGGGGYSTGRGLVPQSQQTGRG
GYSAGGWGRGTSQQQFAERPPEYQGRGRGGPPQQGGRGSYGSGRGSGGSGGGPFHGGPSR
PPYPELHQATQPFHGPASFEAGSSSRPPEHAPSAQSLHIPEEAGQAIQPVPSSSKSVRFP
LRPGKGCTGTKCIVKANHFFAELPDKDLHQYDVTITPEVASRGVNRAVMEQLVKLYRESY
LGKHLPAYDGRKSLYTAGPLPFVSKEFRITLIDDDDGSGMQRRECEFRVVIKLAARADLH
HLGLFLQGKQADAPQEALQVLDIVLRELPTSRYCPVGRSFYSPYLGRKQSLGEGIESWRG
FYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDVSSRPLSDADRVKIKKALRG
VKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPC
LQVGNQQRANYLPMEVCKIVEGQRYSKRLNERQITALLRVTCQRPQEREYDIIETVHQNA
YHEDPHAKEFGIKISEKLASVEARILPAPWLKYHDTGREKNCLPQVGQWNMMNKKMVNGG
TVNNWICINFSRQVQDSVALRFCYELSQMCYISGMAFTPEPVLPPISARPEQVEKVLKTR
YHDAVTKLQTQRKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFKMSKQY
LANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVA
SQDWPEITKYAGLVCAQAHRQELIQDLFKTWQDPVRGTVSGGMIKELLISFRRATGHKPQ
RIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPLVTFVVVQKRHHTRLFANNHND
RNAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADALQ
SLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMISGLAAGRGGMGG
SAGPRSTRAPVAATAVRPLPALKENVKRVMFYC
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggttaggaagaagagaactgatgttccttctgctggaggtgagagctcccactcccat
gacacgggtgttggcagtggtcgtgctacccaacgcccttctcagcaaggaggagctgga
gggggaggatactcaactggaagaggtctggttccacagtcccagcaaactggtcgggga
ggttacagtgctggtggttggggtcggggtacgtcacaacagcagtttgctgaaagaccc
cctgaataccaaggtagaggaaggggtgggcctcctcagcaaggaggtcgtgggagctat
ggcagtggtcgaggcagtggtggcagtggaggagggcctttccatggtggaccatcccga
ccaccttatcccgagctgcaccaagcaacccaaccttttcatgggcctgcatcatttgag
gcaggttcttcatccagaccccctgagcatgcaccatcggcacagtcgcttcacatcccg
gaagaagctggccaagcaattcagccagtcccttcatcaagcaagtctgtgaggtttcct
cttcggcctggaaagggttgcactggcacaaagtgtatagtcaaggctaaccatttcttt
gctgaactgccagataaagatttgcaccagtatgatgttactataacaccggaggttgca
tcacgtggagtgaaccgagctgtaatggagcagctggtaaaattgtacagagaatcatat
cttggaaagcaccttcctgcttatgatggtcgaaagagcctttacaccgctgggcctctc
ccttttgtgtcaaaggagtttaggatcacccttattgatgatgatgatgggtcgggaatg
caaagaagagagtgcgaatttagagttgtgatcaaactggctgcacgtgctgatctgcat
catcttggactctttctgcaagggaagcaagctgatgcacctcaggaagctctccaggtt
cttgacattgttcttcgtgaattacctacttctaggtactgtcctgttggccgttcattt
tactccccttacctagggagaaagcaatcgttgggtgagggaatagaaagttggcgtggt
ttctaccaaagcattcgtcccacacagatggggctctcacttaatattgatatgtcttct
actgctttcattgagccattgccagttattgattttgttgcacaattgctgaatcgggat
gtttcttctagaccactatctgatgctgatcgtgtgaagatcaaaaaggctcttagagga
gtcaaggtggaagttacgcaccgaggaaacatgcgaagaaaatatcgcatatctggttta
acatcacaagcaactagagagctgacttttcctgtagatgaaagaggtacaatgaaatct
gttgtggagtacttttatgaaacttatggtttcgtaatccaacacacccaatggccttgt
ctacaagtcggaaaccagcagagagcaaattatttgccaatggaggtatgcaagattgtt
gagggtcagaggtactccaagaggttgaatgagagacagatcactgctctgctgagggtc
acctgccagcgtcctcaggaaagagagtatgatatcattgagacggtacatcagaatgct
taccatgaggaccctcatgccaaggaatttggaattaaaattagtgagaagcttgcttca
gttgaagcacgcattctacctgcaccatggcttaaatatcatgataccggtagagagaag
aactgccttcctcaagttggccaatggaatatgatgaataagaaaatggttaatggtggg
actgtaaacaactggatctgcataaatttttctcggcaagtccaagatagtgtggcacta
aggttttgttatgaactttcacaaatgtgttatatctctggcatggcttttactcctgaa
ccagtgcttcctccaattagtgctcgtccagagcaagtggagaaggtcttgaaaacaaga
tatcatgatgctgtgactaaactccaaacccagcgcaaagagcttgacctgctaattgtt
attcttccagataataatggctctctttatggtgatttgaaaaggatttgtgagacagat
cttggaattgtttctcagtgctgcttgactaaacatgtatttaaaatgagcaaacagtat
ttggctaatgtggcattgaagattaatgtcaaggttggaggaaggaatacagttcttgtt
gatgcgatatcacgacgaatacctctagtcagtgaccgaccgactataatttttggtgcc
gatgttacccatccgcaccctggggaggattcaagcccttctattgcagctgttgttgcc
tcccaagattggcccgagattacaaagtatgctggtttggtttgtgctcaagctcatcgc
caggagctcatccaagatttattcaagacatggcaggatccagtaagggggactgtttct
ggtggtatgattaaggaactcctaatatctttccgaagagcaactggacataagccacag
cgcatcatattctacagggatggtgtcagtgaaggccagttttatcaagtattgttgtat
gaactagatgctattcgtaaggcatgtgcttctttggagccaaattatcagcctcttgtt
acctttgttgtagtacaaaagcgacaccacacaaggttgtttgctaacaaccataatgat
cgcaatgctgttgacaagagtgggaatattttgcctggcacagtggtggactccaaaatc
tgtcatcccacggagtttgacttctacttatgtagccatgctgggattcagggtacaagc
cgtccagctcattatcatgtgctatgggatgagaacaagtttacagctgatgctttgcag
tctcttacaaacaacctctgctatacatatgcaaggtgcacgcgatctgtgtctatcgtt
cctcctgcatactatgctcatcttgctgcattccgagctcgtttttacatggaaccagag
acttcagacagtggatcaatgataagtggcctggcagcagggcgaggaggtatgggtgga
agtgctggtccccgaagcacaagagcacctgttgctgctactgctgtgagacctctgcct
gcccttaaggaaaatgtcaagcgggttatgttttattgttag
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integrated database retrieval system
