Gossypium arboreum (tree cotton): 108456651
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Entry
108456651 CDS
T05776
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108456651
04121 Ubiquitin system [BR:
gab04121
]
108456651
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108456651
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108456651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
108456651
NCBI-ProteinID:
XP_017610703
UniProt:
A0A0B0NHR9
LinkDB
All DBs
Position
9:complement(49521044..49525178)
Genome browser
AA seq
1079 aa
AA seq
DB search
MSFQGRNRSRNPSQSTRQEWVPRGSSSTTTTVESSSTAASNSTPNVNQTSTRNDNRYRQT
GRPTNHRRDREKGRSETQVAVRKEVDPNLPQLVQEIQDKLIKSTVECMICYDMVPRSGAI
WSCSSCYSIFHLNCIKKWARAPTSVDLVAEKNQGFNWRCPGCQSVQFTSSKEIRYVCFCG
KRTDPPSDLYLTPHSCGEPCGKPLEKELGLGSRVMKDELCPHVCVLQCHPGPCPPCKAFA
PPRLCPCGKKVITTRCSDRKSVLTCGQRCGKLLECGRHQCERICHVGACDPCKVLINAPC
FCKKKVEVVICGDMVVKGKVKAEDGIFSCSSKCGKKLRCGNHYCDENCHPGPCGDCELMP
SKIRSCYCGKTSLQEQRQSCLDPIPTCSETCAKFLPCQVHRCDQVCHAGNCPPCLVLVTQ
KCLCGSTSRRVECYKTTLENERFTCDKPCGRKKSCGRHRCSERCCPLSNSNSLRSGGWDP
HFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPSC
QLPCSVPQPCGHSSSHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCGKT
RQCGLHACGRTCHPAPCDASSGAEPGVRTSCGQTCGAPRRDCRHTCSAPCHPSAPCPDVR
CDFRVTITCSCGRLSATVPCDAGGCTGGFNADTVFEASIIQKLPVPLQLVESTGKKIPLG
QRKLMCDDECAKLERKRILADAFDITPPNLDALHFGENLVASEVLFDLYRRDPKWVLAVE
ERCKLLVLGKNRGTTTGLKVHVFCPMLKDKRDAIRIIAERWKLTISAAGWEPKRFIVVHV
TAKSKPPARIIGAKVSTSTGALHPPVFDPPVDMDPRLVVSFLDLPRESDISALVLRFGGE
CELVWLNDKNALAVFSDPARAATAMRRLDHGSIYTGAIAFVQSGGASSANNAWGGTGPSS
AVKANPWKKAVVQELGWKEDSWGGDESLGVTSDPGSAWKGKDAPIAASVNRWSVLDSETG
VSSSSGAVRSEDPSKLAGVQSLSKMDSNAANSSSARLLGGGLNETEPLEVVDDWEKAYE
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaaggccgaaatagatcaagaaacccttcacaaagcactcgtcaagaatgg
gttcctagaggatcttcatccacaaccaccaccgttgaaagcagctcaacggccgcctct
aattcaacccctaatgtcaaccaaacctcaacacgaaatgataataggtacagacaaact
ggtcggcccaccaaccataggagagatagggaaaagggaaggagtgagactcaggtggcg
gtaaggaaggaggttgatcctaatttgccacagcttgtgcaggaaattcaggacaagctt
ataaagagtacggttgaatgtatgatttgttatgatatggtaccgaggtctggtgctata
tggtcgtgctcaagttgttattctatctttcacctcaattgtattaagaaatgggcgagg
gcacccacttctgttgatttggtggccgagaagaatcagggttttaattggcgttgtccg
ggctgtcagtctgtgcagttcacatcctctaaggagatacggtatgtttgcttttgtgga
aagaggaccgaccctccttctgatttgtacttgactccgcattcatgcggggagccctgt
ggaaagccccttgagaaggagctgggattaggttctagggtgatgaaggatgaactttgc
cctcatgtttgtgtcttgcaatgtcaccctggtccatgtcctccttgtaaggcgtttgct
ccaccacgtttgtgtccttgtggtaagaaagttattacaaccagatgttctgataggaag
tcggttcttacttgtggtcagcggtgtggtaaacttcttgagtgtgggcgccatcagtgt
gaacgtatttgccatgtcggagcttgtgatccttgcaaagttctaattaatgccccctgt
ttctgcaagaaaaaggttgaagttgtcatctgcggtgacatggttgtgaagggaaaggtg
aaagcagaagatggcattttttcttgtagttcaaagtgtggaaagaagcttagatgtggt
aaccattactgtgatgaaaattgccatcctggtccttgtggggattgtgagctgatgcca
agcaagatcaggtcttgttactgtgggaaaacaagcttgcaggagcaaaggcaaagttgt
ttggacccaattccaacttgttcagagacatgtgccaagttccttccttgtcaagtgcac
cgatgtgaccaagtctgtcatgctgggaactgtccaccttgtctagttcttgtcacccaa
aaatgcctctgtggatcaacttcgcggagggtggaatgctacaaaacaacacttgaaaat
gagagatttacatgtgacaagccttgtgggcgtaagaagagttgtggtagacatcgatgt
agtgagcgatgctgccctctctcaaactctaatagtcttcgctccggtggttgggatcca
cacttctgccaaatggcatgtgggaagaagctgaggtgtggacagcattcttgtgaatct
ctttgtcacagtggtcactgccccccatgcttggaaacgatctttactgatttgacatgt
gcttgtggaagaacttcaatccctccaccattgccttgtggtacaccaccaccttcatgt
caacttccatgctcagttcctcagccttgtggccattcgtcttctcacagctgccatttt
ggagactgtccaccttgttctgtgcctgtggcgaaggaatgcattggaggacatgttgtt
cttaggaacattccttgtgggtcaaaagatatcagatgtaacaagctctgcgggaagacc
aggcaatgtggattacatgcatgtgggaggacatgtcacccagcgccatgtgatgcatca
tctggagctgagcctggtgtcaggacctcttgtgggcagacatgtggtgcccctcggaga
gactgcaggcatacatgttctgcaccttgtcatccctctgcaccatgtcctgatgttagg
tgtgattttcgagttacaatcacgtgttcttgtggccggctaagcgcaactgtcccttgc
gatgctgggggctgtactggtggcttcaatgctgatacagtttttgaagcttctattatc
caaaaattgcccgtgcctcttcaactagtggaatcaactggcaaaaagattcctcttgga
caaaggaagcttatgtgtgatgatgaatgtgctaagttggagcgcaaacggattcttgca
gatgcctttgacatcactcccccaaatttggacgcacttcattttggtgagaatttggtt
gcgtcagaggtgctttttgacctgtacaggcgtgatccgaagtgggttctagctgtagaa
gagagatgcaagcttttggtacttggcaagaacagaggaacaacaacgggtctgaaggtt
catgtgttctgtccaatgctgaaggataagagagatgctatcaggataatagcagaaagg
tggaagcttactattagtgctgctggttgggagcccaaacgttttattgtggttcatgtt
actgccaaatccaaaccaccagctcgcatcattggggctaaagtgtcgaccagtactggg
gcgttacaccctcctgtttttgatcctccagtagacatggatccaaggcttgttgtttct
ttcctagatttgccccgagaatctgatataagtgcattagtgttgaggtttggtggggag
tgtgaacttgtttggttgaatgacaagaatgcattggctgtatttagtgatcctgctcga
gctgcaacagctatgaggagattggatcatggatcaatttatactggggcaattgccttt
gttcaaagtggtggagcatcatctgctaataatgcgtggggaggaacagggccaagttct
gctgtaaaggcaaatccatggaagaaggctgtggtgcaggagcttggttggaaggaagat
tcatggggtggtgatgagtctcttggtgtcacttcagatccgggctctgcatggaaaggc
aaagatgctccaattgctgcttcagttaaccgctggagtgttctggattctgaaacaggt
gtaagctcatcttctggagcagttcgatcagaagatccttcaaagctggctggggttcaa
tccttgtcaaaaatggattcaaatgctgccaattcaagttcagctaggctgctgggtggg
ggtttaaatgaaacagagccattggaggttgtagatgattgggaaaaggcttatgaatga
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