Gossypium arboreum (tree cotton): 108456692
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Entry
108456692 CDS
T05776
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108456692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108456692
03110 Chaperones and folding catalysts [BR:
gab03110
]
108456692
03029 Mitochondrial biogenesis [BR:
gab03029
]
108456692
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108456692
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108456692
Messenger RNA biogenesis [BR:
gab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108456692
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP60 / Chaperonin
108456692
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108456692
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108456692
Exosomal proteins of other body fluids (saliva and urine)
108456692
Exosomal proteins of breast cancer cells
108456692
Exosomal proteins of colorectal cancer cells
108456692
Exosomal proteins of bladder cancer cells
108456692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
108456692
NCBI-ProteinID:
XP_017610777
LinkDB
All DBs
Position
9:84810190..84815465
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFASSLASKARAARNTTYQIGSRLSWNRNYAAKDIKFGVEARALMLKGVEELSDAVRV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIEDGKTLYNELEVVEGMKLDRGYISPYFITNTK
NQKCELDDPLILIQEKKVSSLNAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKSSLHDLAVLTGGEVITEELGMNLEKVDLDMLGTCKKVTVSKDD
TVILDGNGDKKAIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAAEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVVELPKDEKDVPAMPGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcttcaagccttgcttctaaagctagggctgctaggaacactacatat
cagattggtagtaggttgagttggaataggaactatgctgcaaaagatattaaatttggg
gttgaagctcgagctttgatgcttaaaggtgttgaagagctttctgatgctgttagagta
accatgggtcctaagggtcggaatgtggttattgaacaaagctacggtgctcctaaagtg
actaaagatggtgtaactgttgcaaagagtattgaattcaaagacaaagtgaagaacatt
ggtgcgagtcttgtgaaacaagttgcaaatgccaccaatgatgtagctggtgacggaact
acctgtgcaacggtgcttacacgagcaatttttaccgaaggatgcaagtctgttgctgca
ggaatgaatgcaatggaccttaggcgtggcataacaatggcagttgatgccgttgttaca
aacttgaaaagccgggcaaggatgattagcacatctgaagagattgctcaggttggaaca
atatcggctaatggagagagggaaattggtgagttgattgcaaaggccatggaaaaagtt
ggcaaagaaggggtgataacaattgaggatggtaaaacattatataatgagttggaagtt
gttgaaggcatgaagctagacaggggctacatatccccttatttcatcaccaacactaaa
aaccaaaaatgtgaattagatgatcctcttatcctaattcaggagaagaaagtatcaagc
ttgaatgctgttgtaaaagtattagagttagctttaaagagacaaaggcccttgctgatt
gtagctgaagatgtagagagcgaagcacttgctacgctcattcttaacaagcttcgtgct
ggaatcaaggtctgtgccatcaaagccccaggttttggtgaaaataggaagtctagtctg
catgatcttgctgtcctcactggaggagaggttataacagaagaacttggcatgaacctt
gaaaaggtggatctggacatgctcggcacttgcaaaaaggttactgtctcgaaggatgac
actgttattcttgatgggaatggtgacaaaaaagccattgaggaaagatgtgaacagatt
agatcagcaattgaattgagcacctctgattatgataaggagaagttgcaagagagattg
gcaaaactttctggtggtgttgctgtcttgaagattggtggagctagtgaagctgaagtt
ggagagaagaaggatagagttacagatgcattaaatgctacaaaggcagctgcagaggaa
ggcatcgtgccaggaggtggtgttgctcttttatatgcatcgaaagagttggacaagcta
cctacggccaactttgaccagaagattggtgttcaaatcatccagaatgctctaaagaca
cctgtacacacaattgcttcaaatgctggagtcgagggagctgtcattgttggtaagctg
ttggagcaggataaccctgatcttggctatgatgcagccaaaggtgaatatgttgatatg
gtaaaggctggtattattgatccattgaaagtaattagaactgctttggtggatgctgca
agcgtgtcgtcattgatgacaactactgaagctgttgtagtcgaacttccaaaggatgag
aaggatgttccggcaatgcctggcggtatgggtggcatggattattaa
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