Gossypium arboreum (tree cotton): 108456693
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Entry
108456693 CDS
T05776
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108456693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108456693
03110 Chaperones and folding catalysts [BR:
gab03110
]
108456693
03029 Mitochondrial biogenesis [BR:
gab03029
]
108456693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108456693
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108456693
Messenger RNA biogenesis [BR:
gab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108456693
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP60 / Chaperonin
108456693
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108456693
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108456693
Exosomal proteins of other body fluids (saliva and urine)
108456693
Exosomal proteins of breast cancer cells
108456693
Exosomal proteins of colorectal cancer cells
108456693
Exosomal proteins of bladder cancer cells
108456693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
108456693
NCBI-ProteinID:
XP_017610781
LinkDB
All DBs
Position
9:84802721..84807612
Genome browser
AA seq
574 aa
AA seq
DB search
MYRFASSLASKARAARNTTYQIGSRLSWNRNYAAKDIKFGVEARALMLKGVEELADAVRV
TMGPKGRNVVIEQSYGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLYNELEVVEGMKLERGYISPYFITNTK
TQKCELDDPLILIHEKKVSSLNAVVKVLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKSSLHDLAVLTGGEVITEELGMNLEKVDLDMLGTCKKVTVSKDD
TVILDGNGDKKAIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVVELPKDENVPAMPGGMGGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcttcaagccttgcttctaaagctagggctgctaggaacactacatat
cagattggtagtaggctgagttggaataggaactatgctgcaaaagatattaaatttgga
gtggaagctcgagcattgatgcttaaaggtgttgaagagctcgctgatgctgttagagta
accatgggtcctaaggggcggaatgtggttattgaacaaagctacggtgctccaaaagtg
actaaagatggtgtaactgttgcaaagagcattgaattcaaagacaaagtgaagaacgtt
ggtgcgagtcttgtgaaacaagttgcaaatgccaccaatgatgtagctggtgatggaact
acctgtgcaacggtgcttacacgagcaatttttaccgaaggatgcaagtctgttgctgca
ggaatgaatgcaatggacctaaggcgtggcataacaatggcagttgatgctgttgtaaca
aacttgaaaagccgggcaaggatgattagcacatctgaagagattgctcaggttggaaca
atatcagctaatggtgagagggaaattggtgagttgattgcaaaggccatggagaaggtt
ggcaaagaaggggtgataacaattcaggatggtaaaacattatataatgagttggaagtt
gtcgagggcatgaagctagaaaggggctacatatccccatatttcatcaccaacactaaa
acccaaaaatgtgaattagatgatcctcttatcctaattcatgagaagaaagtatcaagc
ttgaatgctgttgtaaaagtattagagttagctttaaagagacaaaggcccttgctgatt
gtagctgaagatgtagagagcgaagcacttgctacgctcattcttaacaagcttcgtgct
ggaatcaaggtctgtgccatcaaagcccccggttttggagaaaacaggaagtctagtctg
catgatcttgctgtcctcacaggaggagaggttataacagaagagcttggcatgaacctt
gaaaaggtggatctggacatgcttggcacttgcaaaaaggttactgtctcaaaggatgat
actgttattcttgatgggaatggtgacaagaaagccattgaagaaagatgtgaacagatt
aggtcagcaattgaattgagcacctctgattacgataaagagaagttgcaagagagattg
gcaaaactttctggtggtgtggctgttttgaagatcggaggagctagtgaagctgaagtt
ggtgagaagaaggatagagttacagatgcactgaatgcaacaaaagcagctgtagaagag
ggtattgtgccaggtggtggtgtcgctctgttgtatgcatcgaaagagttggacaagcta
cctacagctaactttgaccagaagattggtgttcaaataatccagaatgctctaaagaca
cctgtgcacacaattgcttcaaatgctggagtcgagggagctgttattgttggtaagctg
ttggagcaggataaccctgatcttggctatgatgcagccaaaggtgaatatgtcgatatg
gtaaaggctggtattattgatccattgaaagtaattagaaccgctttggtcgatgctgca
agtgtgtcgtcgttgatgacaactaccgaagctgttgtagtcgaacttccaaaggatgag
aatgttccggcaatgcctggcggtatgggtggcatggattattaa
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