Gossypium arboreum (tree cotton): 108456710
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Entry
108456710 CDS
T05776
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108456710
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108456710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
SCIMP
Motif
Other DBs
NCBI-GeneID:
108456710
NCBI-ProteinID:
XP_017610806
UniProt:
A0A0B0MB02
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Position
8:complement(22507915..22514534)
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AA seq
869 aa
AA seq
DB search
MNYEQRLKAAAKIVLAYDERAGDDTVDCVEFGVTATLKPHQVDGVSWLVRRYVLGVNVVL
GDEMGLGKTLQAISFLSYLKVHQKSPGPFLVLCPLSVTDGWVSEIVKFTPKLEVLRYVGD
KEHRRSLRKTIYEHVKEKSSSNVPSLPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQR
LKNPSSVLYNVLNDRFIMPRRLLMTGTPIQNNLTELWALMHFCMPSVFGTLNQFLSLFEE
AGDISSDSTSSKSKELFKSLKYILQAFMLRRTKAKLIESGNLVLPPLTEITVMAPLVSLQ
KKVYTSILRKELPKLLALSSGSCSHHSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLV
QGSGKLMVLDQLLWKLYDSGHRVLLFAQMTHTLDILQDFFELRKYSYERLDGSIRAEERF
AAIRSFSKQSAEGSVNSESDQNAAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQ
ALQRAHRIGQMNHVLSINLVTEHSVEQVIMRRAERKLQLSHNVVGDHVMDQEGKEMEGAE
MGDLRSIIFGLHMFDPTQTNNEEAYELKTSELSAMAEKVIAMRYEQMLGKNDGKFEINAG
YLMDGHDVHMRESSVSNDPGLDEVSYLSWVEKFKVASQSGDNQIMALESSRNFPEDRHLK
VEAAKKKVEEKKVAKWEANGYHSLSVQDPCPMDGDMLSDSGSVFFVYGDCTDPSKVCPSV
PAIIFSCIDNSGNWGHGGMFDALAKLSASVPVAYERASEFQDLHLGDLHLIRVNEDVKEN
NTPLWVALAVVQSYNPRRKVPRSDITMPDLERCLSKASFSAAENSASIHMPRIGYQDRSD
RAQWYTVERLLRKYASIYGVKIFVYYYRR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaacagaggcttaaagccgcggccaaaatcgtcctcgcgtacgatgaacgc
gccggagacgatacggtggattgtgtagagtttggagtcaccgcgacgctaaaacctcac
caagtcgacggagtgtcttggcttgttaggagatatgttcttggcgtcaacgtcgttctt
ggggatgagatgggattggggaagactcttcaagctatttccttcttgagctatttgaag
gtccatcagaagtcaccggggccatttttggtgctttgtcccttaagtgtaacagacggc
tgggtgtcagagatagttaaatttacgcctaaattagaagttcttaggtatgtcggtgac
aaagaacaccggcgaagtctacgcaagactatatatgagcacgtgaaagagaagtcatca
tcaaatgttccatccttaccctttgatgtgctcttaacaacatatgacatagcattgatc
gatcaagattttctctctcaaataccctggcattatgctgtaatagatgaagctcaaagg
cttaaaaatccttccagcgtactgtataatgtccttaacgataggtttattatgccaaga
cggttgttgatgactggtactcctattcagaacaatctcactgaactctgggctttgatg
cacttttgtatgccctcggtgtttggaaccctaaaccagtttctttctttattcgaagaa
gctggagatatttcatcagatagtacatcatctaagtccaaggagttgtttaagagttta
aagtatatattgcaagcttttatgcttcgacggacaaaagctaaacttattgagtctgga
aatctagtactcccgcctcttactgagattactgtgatggctccattagttagcctgcaa
aagaaggtgtatacttcaatattaagaaaggagcttccaaaacttcttgctttatcttct
ggctcatgtagccatcattctttacaaaatattgtaattcaactaaggaaagcatgtagc
cacccttacctgttccctggcattgagcctgagccatatgaagagggtgaacaccttgtt
cagggcagtgggaagcttatggttttagatcaactactctggaagctatatgattctggg
catcgtgtccttctctttgctcagatgacacatacgcttgacattttacaggattttttt
gagttacgaaagtattcctatgagcggcttgatggatccattcgagctgaagagcggttt
gctgcaattagaagtttcagcaaacaatcagctgaagggagtgtgaattcagaatctgac
caaaatgctgcttttgttttcttgatctctactagagctgggggtgttggcttgaatctg
gtagctgctgatactgttatattctacgagcaagactggaatcctcaggtagacaagcag
gctctgcaacgagcacatagaataggccaaatgaatcatgtgttgtccataaaccttgtt
acggaacatagtgtggaacaggtaattatgcggagagcagaaaggaagctgcagcttagt
cataatgttgtaggagatcatgtcatggaccaggaggggaaagaaatggaaggagctgaa
atgggtgatttgcgatccatcatatttggattgcatatgttcgatcctactcagaccaat
aatgaagaagcatatgagttaaagacatctgagctaagtgctatggccgagaaagtaatt
gcaatgcgttatgaacaaatgttaggcaagaatgacggcaagtttgagattaatgcaggg
tatttgatggatggccatgatgttcatatgagagagagttctgtcagcaatgatcctggt
cttgatgaggtttcatacctttcttgggttgaaaaattcaaggtagcttcacagtcgggt
gataatcaaatcatggcgttggaaagtagtaggaactttcctgaggacaggcatctgaaa
gttgaggctgcaaagaagaaggtggaggaaaaaaaggtggctaagtgggaagctaatgga
taccattcactgtctgtccaagatccttgtccaatggatggtgatatgctgtcagattct
ggctctgttttttttgtttatggcgattgtactgatccatcaaaagtttgtccctctgtg
cctgctataatattcagttgtattgataattctggaaactggggtcatggtggaatgttt
gatgctctggcgaagctttctgctagtgttcctgttgcatacgaacgagcatccgagttt
caggaccttcatctcggtgatcttcatcttataagagtcaatgaggatgtcaaggaaaat
aatacaccattatgggttgctttggctgttgttcaatcttataatccaagacgtaaagtt
cctcgtagtgacatcactatgcctgatctggaacgttgtttatcaaaggcatcattctca
gcagctgaaaattctgcttcaatccacatgccacgaattggatatcaagatcgatcagat
cgtgctcagtggtacaccgtggaacgtcttctgagaaaatatgcttccatttatggtgta
aagatctttgtgtattattaccgtcggtaa
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