Gossypium arboreum (tree cotton): 108456737
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Entry
108456737 CDS
T05776
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108456737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108456737
Spliceosome [BR:
gab03041
]
Complex A
Other components
Complex A specific factors
108456737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
108456737
NCBI-ProteinID:
XP_017610855
UniProt:
A0A0B0MVF8
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MDSVQTNLNDPQSFSVQTLNSYNQNPPPPPSQTFDSDPVLEHNNANNGALSNPDAHSNTI
NNTSSFKPDIHKPLLSENGLTNTHSGTTDKDYSGGEEETTSRRRRRSRWDPPSNSNNHQT
GNDESASGTKKRKSRWADDEPKPVIQLPDFMKDFTGGIQFDPEIQALNSRLLEISRMLQS
GLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLTKERQEIISQILKKNPAFKPPA
DYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQ
QKRDLKPDPAENEDLHVLVEAETQESLDAAAAMVEKLLQPVDEVLNEHKRQQLRELAALN
GTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTTGKKMDD
EYQNFLAELGGTVPDSANKQNSSSVSSGSNPPWASSSGAAGSAHPGLGSNAVKPPKEYDD
TNLYIGYLPPSLDDDGLISLFSAYGDIVMAKVIKDRVTGLSKGYGFVKYASVDMANNAIK
GMNGSLLEGRTIAVRVAGKPPQPAVPPGPPTLSMPAYPVSSQPVGAYPSRQFTTGGPIPN
AAPASYAGNPVPWGPPVPPPPPYAPYAPPPPPPPGSTIYPPVHGQPMPPYGLQYPPQMQT
VPPGVAPPPPPVTSSETAQSFPPGVQSENSTSAPAMPANIYGNSMTAMPPNSQSAYPTSS
LGYSSYYNAVPPPPPPPLPTSSTDNSQSLSNVPWAPNPLLTPAASSGEKTTYGADTEYEK
FMAEMK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtccaaacaaaccttaatgatccccaatctttttctgtgcaaaccctaaat
tcatacaaccaaaaccctcctccgcctccatctcagacattcgattccgatcctgtcctt
gaacacaacaacgccaacaacggtgccctgtctaatcccgatgcccattccaatactatt
aacaatacttcttcatttaaacccgacatccacaagcctctactgtcggaaaatgggtta
actaacacccatagcggtaccacagacaaggattattctggcggggaagaggagaccacc
agcagaaggcgaaggaggagccgctgggacccgccctcaaattccaacaaccaccagaca
ggtaatgatgagtctgcctctggaaccaagaagaggaagtcccggtgggcagatgatgag
cccaagcccgtgattcagctccctgattttatgaaggatttcactggaggtatccaattt
gaccctgagattcaagctttgaatagtaggcttctagagattagtaggatgcttcaatct
ggattgcctttggatgatagacctgagggagctaggtctccttcgcctgaacctatatat
gataatttgggaattaggattaacaccagggaataccgggcaagagagagattgaccaaa
gaacgacaagaaattatatctcagattcttaagaagaatcctgcgtttaagccaccagct
gactataggccaccaaagcttcagaagaagctttatatacccatgaaagaatacccaggc
tacaattttatcggcttgattattgggcctagagggaatacccaaaagaggatggagaag
gaaacgggtgcgaagattgtaattaggggtaaaggttccgtgaaagaaggtaggctgcag
cagaagagagatttgaagcctgatcctgcagagaacgaggacttgcatgttttggttgag
gccgaaacacaagaatcacttgatgctgctgcagcaatggtggaaaagctcttgcagcct
gtagatgaagtattaaatgagcataagaggcaacagttgagggaacttgctgcgttgaat
ggaacaataagagatgaagagtattgtaggttgtgtggtgagcctgggcaccgtcaatat
gcatgtccttctcgcacctcaacctttaagagtgatgttttatgtaagatttgtggtgat
ggtgggcatccaacaatcgattgtccaatgaagggaactacagggaagaaaatggatgat
gaatatcagaatttcttggctgagctaggtggtactgtccctgattcagctaacaagcaa
aactcttcgtcagtcagttctggaagcaatcctccttgggctagcagctctggagctgct
ggaagtgcacaccctggcttaggttccaatgctgttaagccccccaaagaatatgatgat
actaatttgtacattggatacttgcctcctagtcttgatgatgatggtttgattagtttg
ttttctgcttatggtgatattgtgatggcaaaggtaatcaaggaccgggttactggactg
agtaaagggtatggttttgtgaagtatgctagtgttgacatggcaaacaatgctattaag
ggaatgaatggtagtcttctagagggaagaaccattgctgtgagagttgctggcaagcca
ccacaacctgctgtgcctcctggtccacccacattgtcaatgcccgcttaccctgtctct
agtcagccagttggtgcctatccatcacgacaatttacaactggaggtcctattcctaat
gctgctcctgctagttatgcgggaaatccagttccatggggaccaccagttcctcctcct
cccccttatgccccttatgcccctcctccccctcctcctcctggctcaaccatttatcct
cctgttcatggtcagcctatgccaccttatggtttgcaatatcccccacaaatgcagacg
gttcctcctggtgttgcacctccacctccacctgtgacttctagtgaaacagcacaaagt
tttccaccaggagtgcaatctgaaaatagcacgtctgccccagctatgcctgctaatatc
tacgggaactcaatgactgcaatgcctccaaattcacaatctgcatatcctacatcttct
ttaggttactcttcttattacaatgcagttcctccccctccccctcctccactacctaca
tcttccacagataattctcagagccttagtaatgtcccttgggctccaaaccctcttttg
actccggcagcatcctctggagagaaaacaacctatggtgcagatactgagtatgagaag
ttcatggcagagatgaaatga
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