Gossypium arboreum (tree cotton): 108456772
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Entry
108456772 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108456772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108456772
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108456772
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108456772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
108456772
NCBI-ProteinID:
XP_017610916
UniProt:
A0A0B0PTN1
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Position
11:complement(1460262..1462734)
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AA seq
336 aa
AA seq
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MESDTTGCVSSIDEIVEDHEIPHHNLLHHPHPRHAPHHQFSSSKPHHNGTNNVNSISNIV
GPTAIAPAASVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKIRVHNRCPTCRQELGDIR
CLALEKVAESLELPCKYYKLGCPEIFPYYSKLKHEGICIYRPYNCPYAGSECSVVGDIPF
LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
PVYMAFIRFMGDETEARNYSYSLEVGANGRKLIWEGAPRSIRDSHRKVRDSHDGLIIQRN
MALFFSGGDRKELKLRVTGRIWKEQQNPDANMCIPN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatactaccgggtgcgtatcatctatagatgaaattgttgaagatcatgag
atccctcaccataatctactccaccacccacaccctcgtcatgcccctcatcatcaattt
tcatcgtcaaagcctcatcacaacggcactaataatgttaatagtattagcaatatcgtg
ggtccaacggcgattgctccggctgctagtgtccatgaattgttagaatgtcctgtttgc
accaattctatgtatccaccaattcatcagtgccacaatggacatacactttgttctacc
tgtaaaatacgagtacacaaccggtgcccaacttgtcggcaggaactcggtgatattaga
tgtttagcattggagaaagtcgccgagtcccttgagttaccttgcaaatactacaagttg
gggtgcccggaaatattcccctattacagcaaactcaaacacgaggggatttgcatctac
agaccatacaattgtccatatgctggttcagagtgttccgttgttggggatatccctttc
cttgttgcccatttgagggatgatcataaggtcgacatgcacaccggctgcacatttaat
catcgatacgtgaaatccaatcctcgggaagttgaaaatgctacatggatgctaacagta
ttccattgttttggtcagtatttctgcctacactttgaagccttccagttgggaatggct
ccagtttacatggcatttatccgtttcatgggtgacgagacggaagctaggaactatagc
tacagccttgaagtcggagcaaacggacggaaacttatatgggaaggcgccccacgtagc
atccgtgatagtcaccggaaagtcagggacagccatgatggtctaattatccaacgaaac
atggcacttttcttctccggtggggatagaaaggagctgaaactgagggttactggacga
atatggaaggaacaacaaaatccagatgccaacatgtgcataccaaactaa
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