Gossypium arboreum (tree cotton): 108456785
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Entry
108456785 CDS
T05776
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108456785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108456785
03036 Chromosome and associated proteins [BR:
gab03036
]
108456785
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
108456785
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
108456785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
Beta-prop_SCAP
RMC1_N
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_1st
CFAP43_N
WDR54
Beta-prop_VPS8
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
108456785
NCBI-ProteinID:
XP_017610940
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All DBs
Position
11:1103839..1106234
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSLNSYSNLKGQSRCPLQEQLLQRKNSKENMDRFIPNRSAMDFDYAHYMLTDGRKIK
ENQTVCSPAREAYRKQLAETLNMNRTRILAFKNKPPAPVELFPSEHSTASVHPTKSAKPR
RHILQSSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGNTVYLWDASDSSTSELVTVDDE
NGPVTSVSWAPDGRHIAIGLNNSEVQLWDSASNRQLRTLRGCHRSRVGSMAWNNHILTTG
GMDGQIVNNDVRIRSHVVETYRGHQQEVCGLKWSASGQQLASGGNDNVVHIWDRSMASSN
SPTQWLHRLEEHTSAVKALAWCPFQSNLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV
CSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAA
GDETLRFWNVFGVPEVAKTAPKVNREPFSQLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatctttgaattcttattcaaacttgaagggtcaatctagatgcccactt
caagaacagcttctccagagaaagaattctaaagaaaatatggatagattcataccaaac
cgttcagcaatggactttgattatgcgcattacatgctgaccgatggaaggaagattaaa
gagaaccaaacagtatgctcacctgccagggaggcctacaggaagcagctggctgagacc
ttgaacatgaaccgcacccgaatcttggctttcaagaacaagccaccggcacccgttgaa
ctcttcccttccgagcactcaactgcttccgtacatccgaccaaatccgcaaagcctagg
agacacattctgcagagctctgagagaacattggatgctcctgatctcgttgacgatttt
tacctgaatttattggattggggcagcagcaatgtactagcaatagcactcggaaacact
gtgtatctgtgggatgcttcagatagttctacttcagaacttgtcacggttgatgacgaa
aatggacccgtaacaagtgtgagttgggctcccgatggtcggcatatagccatcggcttg
aacaattccgaagtacaactatgggattcagcttccaaccgacagctacgtactctaaga
ggatgtcacaggtcaagagtgggttcaatggcatggaacaatcacattctcacaactgga
ggaatggatggtcagattgttaacaacgatgtgagaattaggtcccatgttgttgaaacc
tatagagggcatcagcaagaggtttgtgggctgaaatggtcggcttccgggcaacaacta
gccagtggaggcaatgataatgttgttcacatatgggataggtccatggcatcttcaaat
tcaccaactcaatggctacacaggttggaggagcatacctcagctgtcaaagcccttgcc
tggtgccctttccagagcaatctgctggccacaggaggaggtggcggcgatcgaaccatc
aagttttggaacacacacactggtgcatgcttgaattcagttgacaccggctctcaggtt
tgctcattgctgtggaacaagaatgagagggagctattgagttctcatggatttactcag
aaccaattaactctttggaaatatccatcgatggtgaagatggcagagctaaccggccac
acgtctagagtactttacatggctcaaagccctgatgggtgcaccgtggcgtcagctgca
ggggatgagacactaaggttctggaatgtttttggggtcccagaagtggctaaaactgct
ccaaaagtgaaccgtgagccattctctcaattgaaccgtatccggtga
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