Gossypium arboreum (tree cotton): 108456836
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Entry
108456836 CDS
T05776
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108456836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108456836
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108456836
INO80 complex (yeast)
108456836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
PSY3
Motif
Other DBs
NCBI-GeneID:
108456836
NCBI-ProteinID:
XP_017611027
UniProt:
A0A0B0NCX7
LinkDB
All DBs
Position
9:74794817..74804799
Genome browser
AA seq
1536 aa
AA seq
DB search
MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGSQGGAMSHHGNGT
MSERELSLAKRKWRGALNSEEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTSVSPAP
SRMGIPAPKSNLGSSKNRKLLNEQRAGFYDMETTSEWMNDVSSQRFANYHEADLVPKIMY
EPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFYLKGTLDLGSLATMMASDKRF
GSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSESALNSSIPEGAAGNLQRSIL
SEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSVIEREEMEKIGKVWVTIVRRDI
PKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKFMRGAALRTRKLARDMLLFWKR
VDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKANSQPSE
ALPAKDEESNDDEKEDDGGPGVEEDPEEAELKKEALRAAQDAVSKQKKLTSAFDTECIKL
RQAAETEVPLEDNSVAGSSNIDLHNPSTMPVTSTVQTPEMFKGSLKEYQLKGLQWLVNCY
EQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPAL
KTLPYWGGLQERMVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDE
AQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWF
SKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVISELTRKTEIMVHCKLSSRQQA
FYQAIKNKISLAELFDSNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFYFGE
IPNSLLPPPFGELEDIHYAGSHNPITYKLPKLVQQEVLQNSETLCSTVARGVYQEMFYKY
FNVFSSGNVYQSIFQQESISNECCVRSGTFGFSRLMDLSPAEVAFLGTGSFMERLLFSIS
RLDNQFLDGTLDDLMEVLDDDFSSSYLEMGTVRVVTRMLLMPSRSKTNLLRRRIATGPGS
DPFEALVVSHQDRLLSNTKLLHSTYTFIPRTRAPPIGAQCSDRNFAYRITEELHNPWVKR
LLIGFARTSEYNGPRMPDGPHCLIQEVDSQLPVARPALQLTYKIFGSCPPMQSFDHAKLL
TDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRR
DMVRDFQLRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK
DVTVYRLICKETVEEKILQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLEQK
LREIPLQAKDRLKKKQPTKGIRLDAEGDASLEDLANAGAQGTGVDPSPDPEKAKSSNKKR
KSASERQTSAKHRISQKTSEPSLVDNELDDALQDDMQSQRPKRPKRPKKSVNENLEPAIT
TAAAASASGQVPGNEFGPGGFGTEMEHNMAQSNMST
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaggcgccagtcgaaggattcgttttcctactccggtctcttcaatcttgag
cctttgatgaacttcaaagttccacaacctgatgatgattttgattattatgggaatagt
agtcaggacgagagcagaggtagccaaggtggagcaatgtcgcaccatggtaatggaact
atgtctgagagggaattgagtttggcaaagcgaaagtggaggggggcattaaatagtgag
gaggaggacgacgattatcaaggcacccatatcacagaggagcggtatcggtcaatgctt
ggagaacacgtacaaaagtacaaaaggaggttcaaggatacctctgtgagtcctgctcct
tcacgaatgggtattccagctccaaagagcaatttgggtagttccaaaaataggaaattg
ttgaatgagcagcgagcagggttttatgatatggagaccacatctgaatggatgaatgat
gttagttctcagaggtttgcaaactatcatgaagcagatcttgtgcccaaaattatgtat
gaacctgcttatttggatattggggagggtatcacttttaagatccctccaacctatgat
aaactggcattgtcattgaacttgccaagcttctcagatatccgggtggaggagttttac
ctaaagggtactttagatttggggtccttagcaacgatgatggctagtgataaacgattt
ggatctcgaagtcgagcagggatgggagagcctcatcctcagtatgaatcgcttcaggcc
agattgaaggctttggcagcttcaaactcatctcagaagttcagtctcaaggtatctgag
agtgcattgaattcctccattcctgagggggctgctggaaatttacaacggtccattttg
tcagagggtggtgtattacaggtttactatgttaaggttttggagaaaggagacacgtac
gagataattgaacgaagcttaccaaagaaacctaaagtgaagaaagacccttccgtaatt
gagagagaggaaatggagaaaattggaaaagtttgggtcaccattgttagaagagacatt
ccaaagcatcacagaaatttcactaattttcaccgaaagcaactcattgattctaagaga
tttgctgaaaactgtcagcgagaggtgaaattgaaggtgagtagatcactcaaatttatg
aggggtgctgcacttcgcacaaggaaattggctagagatatgctgttgttttggaagcga
gttgacaaggagatggcagaagtgaggaaaagggaggaaagagaagctgcagaagcttta
aggcgtgaacaggagcttcgagaagcaaagaggcagcagcaaaggctcaattttcttata
caacaaacagaactttatagtcactttatgcagaacaaggcaaattctcagccctctgaa
gctttgcctgcaaaggatgaagaatcaaatgatgatgaaaaagaagatgatggtgggcct
ggtgtagaagaagatccagaagaggctgaattgaagaaggaggctctaagagctgctcaa
gacgcagtctctaaacaaaagaagctgactagtgcatttgataccgaatgtatcaagttg
cgtcaagctgctgaaactgaggtgcctttagaagataattctgttgccgggtccagcaat
atagatctgcataacccatccactatgcctgtaacctcaacagttcaaacaccggaaatg
tttaagggttccctcaaggaatatcagttaaagggccttcagtggcttgttaattgttat
gagcagggtttaaatggtattcttgctgatgaaatgggattggggaaaactattcaggca
atggcattcttggcccatttggctgaggagaaaaatatatgggggccttttcttgtcgtt
gctcctgcttcagtattgaataactgggctgatgagattagtcgcttctgtcctgccctt
aaaactcttccatattggggtggacttcaggagcggatggttcttagaaagaacatcaat
ccaaagcgcctttatcgaagggaggctggatttcatattctgattaccagttatcaactg
ctggtgtctgatgagaagtattttcgacgtgtgaaatggcaatacatggtattagatgaa
gcacaggcaatcaagagttcaagcagtataaggtggaaaacactgcttagtttcaactgt
cgtaaccgcttgcttctgactggtacacctatccagaacaacatggcagaactatgggcc
cttctgcattttatcatgccaaccttatttgatagccatgaacagttcaatgaatggttt
tctaagggaattgagaatcatgctgaacatggaggtactttgaatgagcatcagcttaac
agattgcatgcaattttaaagccctttatgctacggcgagtgaagaaagatgtgatttct
gagctgactaggaaaacagagattatggttcactgcaagttgagttcccggcagcaagct
ttctatcaagctattaagaataagatatctctagcagaattgtttgatagcaatcgtgga
catctaaatgaaaagaaaattctgaatttgatgaatattgtcattcagctgagaaaggtg
tgtaaccatccggagttatttgaaagaaatgaaggaagcacatacttctattttggagag
atcccaaattctcttctgcctcccccctttggggagttggaggatatacactatgcaggg
agtcataatcccataacctacaagttgccaaaacttgtccaacaagaggttctacaaaat
tctgaaacattatgctcgactgttgctcgtggagtttatcaagaaatgttttacaaatac
ttcaatgtattctcttcgggaaatgtttatcaatctattttccagcaagagagtatctct
aatgagtgttgcgttagaagtgggacatttgggttctcccgtctcatggatttgtctccc
gcggaggttgctttccttggaactggttctttcatggagagactcttgttttctatttca
agattggacaaccaatttttagatggaactttagacgacctaatggaggtattggatgat
gacttcagttccagctaccttgagatggggacagtcagagttgttactaggatgttgtta
atgccatcaagatccaagaccaatttgctcagaagaagaattgcaactggtcctggcagt
gatccatttgaggctttagttgtctctcatcaggacaggctgctatccaatactaaactt
cttcattcaacatacacatttatcccacgaactagagctcctccaattggtgctcaatgc
tcggatagaaatttcgcttacagaatcactgaagaactacataatccatgggttaagaga
ttgttgattgggtttgctcggacatccgagtataatgggcctagaatgccagatggtcct
cattgcttgattcaagaagttgattctcaattaccggttgcgcgacctgccctccaactt
acatataagatatttggttcttgtccccccatgcaaagttttgaccatgcaaagttgcta
acagattctggcaaacttcagacgcttgatatattactgaaacgtctccgggcagaaaac
caccgcgttcttttgtttgcacaaatgacaaaaatgctgaatatcttggaggactacatg
aactatagaaaatataggtacctgaggctcgacgggtcttctacaattatggatcgacga
gacatggtcagagactttcagctgcggaatgacatttttgtgttcttgctgagtaccaga
gctggtggattgggtattaacttgacagctgccgacactgtaatcttttatgaaagtgat
tggaatccaaccttggatttgcaagccatggacagagctcaccgtttggggcagacaaag
gatgttaccgtctatcgactcatttgtaaggaaacagttgaggagaagattttgcagaga
gcaagtcagaaaagtacagtgcagcagcttgtcatgacaggtggccatgttcagggagat
ctcttggctcctgaagatgttgtatctttacttttggatgatgcacagctggagcagaaa
ttaagagaaattccgctgcaggctaaggatagactaaagaaaaaacaaccaacaaagggc
atacggctagatgcggaaggtgatgcatctttggaagacttagcgaatgctggagctcag
ggtactggggtcgatccatctccagatcccgaaaaagccaagtccagtaataaaaagaga
aaaagtgcttctgaaaggcaaacatctgctaagcataggatttctcagaagacgagtgaa
cctagccttgtggataatgagttagatgatgcccttcaagatgatatgcaatcacagaga
cccaagaggcctaagagaccaaagaagagtgtaaatgaaaacctagaaccagcaattact
actgcagctgctgcatcagcttctggccaggtacctggaaatgagtttggtcctggtggt
tttgggactgaaatggagcataacatggcgcagagtaatatgtcaacgtga
DBGET
integrated database retrieval system
