Gossypium arboreum (tree cotton): 108456837
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Entry
108456837 CDS
T05776
Name
(RefSeq) probable catabolite repression protein creC
KO
K24741
WD repeat-containing protein 20
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gab04990
]
108456837
Domain-containing proteins not elsewhere classified [BR:
gab04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108456837
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Pep3_Vps18
Cytochrom_D1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
108456837
NCBI-ProteinID:
XP_017611030
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All DBs
Position
9:complement(79512779..79518952)
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AA seq
546 aa
AA seq
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MINTANGMMSTSSSSANAQSPGLKTYFKTPEGRYKLHYEKTHPSSLLHYAHGKTVTQVTL
AHLKDKPAPSTPTASSSSFGASTGVKSAAARWLGSGNGSRALSFVGGNGGTKSISSTSRI
GSLGTSSSSTSMTNTNFDGKGTYLISNVGDAIFISDLNSQEKDPIKSIHFSNSNPVCHAF
DQDAKEGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGCVNNSRCTSIAWVPG
GDGTFVVAHADGNMYVYEKNKDGAGDSSFSVIKDQTQFAVAHARYSKSNPIARWHVCQGS
INSIAFSFDGAYLATVGRDGYLRVFDYPKEQLVCGGKGYYGAVLCCAWSMDGKYILTGGE
DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSDGTAETVMYRFGSVGQDTQLL
LWDLEMDEIVVPLRRCPPGGSPTYSTGSQSSHWDNVSPLGTLQPASSIRDVPKISPVVAH
RVHTEPLSGLIFTQESVLTVCQEGHIKIWMRPGIAESQSSNTELLSSSAKDKLLLPSKIG
GSSYKQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacagctaacggtatgatgtcgacatcatcttcatcggcgaacgctcaatcg
ccgggcttgaaaacttattttaaaaccccagaaggtcgatataagcttcattatgaaaag
actcacccttctagccttcttcactacgctcatggcaagactgttactcaggttaccctt
gcgcatctaaaggacaagccagctccgtcaactccaacagcttcatcttccagcttcggt
gctagcactggggtaaaatcagctgcagcaaggtggctaggttctggaaatggcagccgt
gctcttagctttgttggagggaatggtgggactaaaagtattagtagtactagtaggatt
gggtcattgggtacttcaagttcaagcacttcaatgactaatacaaattttgatgggaaa
ggaacttatttaatctccaatgttggtgatgctatttttataagtgatttgaattctcag
gaaaaggatccaataaagtctatccatttcagcaattcaaaccctgtctgccatgctttt
gatcaggatgccaaggaagggcatgatttgcttattgggttgaattctggtgatgtttac
tccgtgtcactgagacagcagttacaggacgttggaaagaagcttgttggggcacatcat
tacaataaagatggctgtgtcaataacagtcgctgtactagtattgcatgggttcctgga
ggtgatggtacttttgtggttgctcatgctgatggaaatatgtatgtgtatgaaaagaac
aaggatggtgctggcgattcttcattctctgttataaaagaccaaactcaatttgctgta
gcacatgcacgttacagtaagagtaatccaattgcaaggtggcatgtttgtcaagggtca
attaatagcattgctttctcctttgatggggcctacttggccaccgttggaagagatggc
tatctgcgagtgtttgattatccaaaagaacagcttgtatgtggtggcaaaggttattat
ggtgctgtactgtgttgtgcttggagtatggatgggaaatatattctgactgggggcgaa
gatgatttggttcaagtttggagtatggaagataggaaggttgtggcatggggtgagggg
cacaactcgtgggtcagtggagtggcgtttgattcatattggtcatcacctaattcagat
ggcacagcggagaccgtgatgtaccgatttggttctgttggacaggacacacaattgcta
ttgtgggacttggaaatggatgaaattgtggtgccattacgtcgatgccctcccggaggg
tctcctacttacagcaccgggagccagtcttcccattgggacaatgtatccccattgggt
accctgcaacctgcctcaagcattcgagatgttccaaaaatttcaccagtggttgctcat
cgcgtacacactgaacccctctcgggtttgatttttacccaggaatctgtacttacggtt
tgtcaagaggggcacataaaaatctggatgagaccaggtattgcagaaagtcaatcaagc
aacaccgaattattaagtagcagcgccaaggataagctattacttcccagcaagattggt
ggttctagctacaagcaatga
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