KEGG   Gossypium arboreum (tree cotton): 108456851
Entry
108456851         CDS       T05776                                 
Name
(RefSeq) cryptochrome-1-like isoform X1
  KO
K12119  cryptochrome 2
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:gab00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    108456851
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-GeneID: 108456851
NCBI-ProteinID: XP_017611056
LinkDB
Position
9:87796597..87799832
AA seq 673 aa
MSFYNNALKDIGISFMNSNTSVPSVSPENMGSNSKTIVWFRRDLRIDDNPALAAAARDGS
VFPVYIWCPKEEEQFYPGRVSRWWLKQSLAHLEQSLKFLGSELVLIKTHSTLSALLDCIK
ATGATKLVFNHLYDPVSLVRDHNIKEKLAEAGISVQSYNGDLLYEPWEIYDEKGQAFTTF
DAYWDKCLNMQMEPISLLPPWRLVPVAVTGTLERCSIEDLGLENETEKASNALLGRAWSP
GWGSADKAITEFVEHNLCDYSRSRLKVGGNSTSLLSPYLHFGELSVRKVFQSARMKQILW
RREQNSQGEESVSLFLKAVGLREYSRYLTFNFPFTHERPLLSNLKYFPWNADVNRFKAWR
QGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKFLLLPWRWGMKYFWDTLLDADLEC
DILGWQYISGSLPDGHELERLDSPQIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAP
HTVLKAAGVELGLNYPKPIIDIDIAREHLREAIFKMWEMEAAAKAATSDGMNEEVFDNSV
GIETSAIPKVILKENSSCPTYSSNDQRVPSFQNGNNGSLHRKRAKCVEEERLPADKPNNH
NKEAGTSRGEEDLCSTAESSASKRQTISRMSFSVPPSCSSSDGRPMLECESSDMKRSWQE
KIDLEQTSSKNGN
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgtcattctacaataatgcactgaaagatatagggatttcttttatgaattcgaacact
tcggtcccttcggtctcaccggaaaacatgggtagtaacagtaagacaatagtttggttc
aggagagatcttagaattgatgacaatcctgctttagccgccgccgctagggatggcagc
gttttcccggtttatatatggtgtcctaaagaggaagaacagttctatccaggtcgagta
tcgcgatggtggttgaagcaatctcttgctcatttggaacagtctttgaagtttcttggt
tctgaacttgtgctgattaagacccatagtactctttcagctcttttagattgcatcaag
gctaccggagcgactaaactcgtgtttaaccatctttatgatccggtttcgcttgttcga
gatcataacatcaaagagaaacttgcagaggccgggatttccgtgcaaagctataatgga
gatttgttatatgaaccatgggagatatatgatgagaaagggcaagcttttacgaccttc
gatgcatattgggataagtgtttgaacatgcaaatggaacccatttcacttcttccccca
tggagattggtccccgttgcagtgacaggaacattagaaaggtgctctattgaagatttg
ggcctcgaaaacgaaacagaaaaagctagcaatgcattgttaggaagagcgtggtctcca
ggttggggcagcgccgataaggctataacggagtttgttgaacataatctatgcgactat
tcaagaagtaggcttaaggttgggggcaactccacatcacttttgtctccgtatcttcat
ttcggggagctaagtgtgaggaaagttttccagagtgcaaggatgaaacagatactatgg
cgaagagaacagaattctcaaggggaagagagtgtgtcactttttctgaaggctgtcggg
cttagagaatattcccggtaccttactttcaactttccgttcactcatgagagaccgttg
ttgagcaacttgaagtatttcccttggaatgctgatgtgaaccgttttaaggcttggaga
caaggtcggaccggatatccgttggtggatgctggaatgagggagctttgggcaactggt
tggatacacaacagaatacgagtgattgtttcgagtttcgcggtgaagtttcttcttctt
ccatggagatggggaatgaagtacttctgggacacacttttggatgcagatttagaatgc
gatattcttggttggcagtacatctctgggagcttaccggatggtcacgagctagaacga
ttagacagtccacagattcaaggctccaaatttgaccctgaaggtgaatatgtaaggcaa
tggctgccggagctagcgaggatgccgactgagtggatccatcatccttgggatgcacct
cataccgtgcttaaagctgcaggtgtggagttggggttgaactatccgaaacccataata
gatatcgatatagctagagaacatctgagagaagctatatttaaaatgtgggaaatggaa
gcagctgcaaaggctgcaacttcagatgggatgaatgaagaggttttcgacaattctgtt
ggtattgaaacctccgcgatcccaaaagttatcctaaaggagaactcttcttgtccaaca
tattcatctaatgatcaaagggttccatcatttcaaaatggcaataatggttcattgcat
aggaagagagcaaaatgtgtggaagaagaaaggttgcctgctgataaaccgaataatcac
aacaaagaagcagggacttcgagaggagaagaagacttatgctcgacagctgagtcttca
gcatcgaagaggcaaactattagcagaatgtcattctctgttcccccgtcttgttcttcg
tccgatggcaggcctatgctggagtgtgaatcgtctgatatgaagcggtcatggcaagaa
aagatcgatttggaacagacatcaagcaagaatggtaattaa

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