Gossypium arboreum (tree cotton): 108456851
Help
Entry
108456851 CDS
T05776
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12119
cryptochrome 2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108456851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
108456851
NCBI-ProteinID:
XP_017611056
LinkDB
All DBs
Position
9:87796597..87799832
Genome browser
AA seq
673 aa
AA seq
DB search
MSFYNNALKDIGISFMNSNTSVPSVSPENMGSNSKTIVWFRRDLRIDDNPALAAAARDGS
VFPVYIWCPKEEEQFYPGRVSRWWLKQSLAHLEQSLKFLGSELVLIKTHSTLSALLDCIK
ATGATKLVFNHLYDPVSLVRDHNIKEKLAEAGISVQSYNGDLLYEPWEIYDEKGQAFTTF
DAYWDKCLNMQMEPISLLPPWRLVPVAVTGTLERCSIEDLGLENETEKASNALLGRAWSP
GWGSADKAITEFVEHNLCDYSRSRLKVGGNSTSLLSPYLHFGELSVRKVFQSARMKQILW
RREQNSQGEESVSLFLKAVGLREYSRYLTFNFPFTHERPLLSNLKYFPWNADVNRFKAWR
QGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKFLLLPWRWGMKYFWDTLLDADLEC
DILGWQYISGSLPDGHELERLDSPQIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAP
HTVLKAAGVELGLNYPKPIIDIDIAREHLREAIFKMWEMEAAAKAATSDGMNEEVFDNSV
GIETSAIPKVILKENSSCPTYSSNDQRVPSFQNGNNGSLHRKRAKCVEEERLPADKPNNH
NKEAGTSRGEEDLCSTAESSASKRQTISRMSFSVPPSCSSSDGRPMLECESSDMKRSWQE
KIDLEQTSSKNGN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctacaataatgcactgaaagatatagggatttcttttatgaattcgaacact
tcggtcccttcggtctcaccggaaaacatgggtagtaacagtaagacaatagtttggttc
aggagagatcttagaattgatgacaatcctgctttagccgccgccgctagggatggcagc
gttttcccggtttatatatggtgtcctaaagaggaagaacagttctatccaggtcgagta
tcgcgatggtggttgaagcaatctcttgctcatttggaacagtctttgaagtttcttggt
tctgaacttgtgctgattaagacccatagtactctttcagctcttttagattgcatcaag
gctaccggagcgactaaactcgtgtttaaccatctttatgatccggtttcgcttgttcga
gatcataacatcaaagagaaacttgcagaggccgggatttccgtgcaaagctataatgga
gatttgttatatgaaccatgggagatatatgatgagaaagggcaagcttttacgaccttc
gatgcatattgggataagtgtttgaacatgcaaatggaacccatttcacttcttccccca
tggagattggtccccgttgcagtgacaggaacattagaaaggtgctctattgaagatttg
ggcctcgaaaacgaaacagaaaaagctagcaatgcattgttaggaagagcgtggtctcca
ggttggggcagcgccgataaggctataacggagtttgttgaacataatctatgcgactat
tcaagaagtaggcttaaggttgggggcaactccacatcacttttgtctccgtatcttcat
ttcggggagctaagtgtgaggaaagttttccagagtgcaaggatgaaacagatactatgg
cgaagagaacagaattctcaaggggaagagagtgtgtcactttttctgaaggctgtcggg
cttagagaatattcccggtaccttactttcaactttccgttcactcatgagagaccgttg
ttgagcaacttgaagtatttcccttggaatgctgatgtgaaccgttttaaggcttggaga
caaggtcggaccggatatccgttggtggatgctggaatgagggagctttgggcaactggt
tggatacacaacagaatacgagtgattgtttcgagtttcgcggtgaagtttcttcttctt
ccatggagatggggaatgaagtacttctgggacacacttttggatgcagatttagaatgc
gatattcttggttggcagtacatctctgggagcttaccggatggtcacgagctagaacga
ttagacagtccacagattcaaggctccaaatttgaccctgaaggtgaatatgtaaggcaa
tggctgccggagctagcgaggatgccgactgagtggatccatcatccttgggatgcacct
cataccgtgcttaaagctgcaggtgtggagttggggttgaactatccgaaacccataata
gatatcgatatagctagagaacatctgagagaagctatatttaaaatgtgggaaatggaa
gcagctgcaaaggctgcaacttcagatgggatgaatgaagaggttttcgacaattctgtt
ggtattgaaacctccgcgatcccaaaagttatcctaaaggagaactcttcttgtccaaca
tattcatctaatgatcaaagggttccatcatttcaaaatggcaataatggttcattgcat
aggaagagagcaaaatgtgtggaagaagaaaggttgcctgctgataaaccgaataatcac
aacaaagaagcagggacttcgagaggagaagaagacttatgctcgacagctgagtcttca
gcatcgaagaggcaaactattagcagaatgtcattctctgttcccccgtcttgttcttcg
tccgatggcaggcctatgctggagtgtgaatcgtctgatatgaagcggtcatggcaagaa
aagatcgatttggaacagacatcaagcaagaatggtaattaa
DBGET
integrated database retrieval system