Gossypium arboreum (tree cotton): 108456877
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Entry
108456877 CDS
T05776
Name
(RefSeq) protein CASP
KO
K09313
homeobox protein cut-like
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108456877
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
108456877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
HAUS6_N
Swi5
Motif
Other DBs
NCBI-GeneID:
108456877
NCBI-ProteinID:
XP_017611096
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All DBs
Position
9:complement(45774074..45791326)
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AA seq
682 aa
AA seq
DB search
MDAPQGGSDGDKTNPSSSPVSVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNRRKL
AESTRDFKKAAPEEKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPA
LASISEQDLKISELESENRKVKVELEEFRTESMHLKNQQATIRRLEERNRQLEQQMEEKV
KEIVEMKQRSLAEENQKTLEVLKDREQSLQDQLRQAKESVSNMQKLHELAQSQLFELRAQ
SEEDRAAKQSEVNLLMDEVERAQTRLFSLEREKGLLRSQLQSTNEESENKRSDVDSNAIL
ENSLSSKEKIISELNMELHNIETTLSNERVQHVNEIKKLNSLLNEKDVALEEMKKELKAR
PTEKLVDDLRKKVKILQAVGYNSIEAEDWEAATSGEEMSKMESLLLDKNKKMEHELTQLK
VKLSERTSLLETAEGKIVELAEKVNEQQKLIQKLEDDILKGYSSKEKKGTLFDDWDLSES
GGNELSENTDQKQVSADQDQSSMLKVICNQRDRFRARLRETEEEIRQLKEKIGELTTELE
KTKADNVKLYGKIRYVQDYNQEKVISRGSKKYAEDLESGFTSDVESKYKKIYEDDINPFA
AFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALS
YLSHGSEETAVVEKNLYRPRGY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatgctccgcaaggcggatccgacggcgacaaaaccaatccttcctcttctcctgtc
tccgttgtctccaatttctggaaagaatttgatctggaaaaagagaaaagtgtgcttgat
gaacaaggactcagaatagctgaaaatcaggaaaacagccagaaaaataggcggaagctt
gctgagagtacaagagatttcaagaaagctgcgccagaggaaaaattaagtttatttaat
tcattacttaagggctaccaagaagaagttgataatcttaccaagagggcaaaatttggc
gagaatgcttttctgaacatctatcaaaagctttatgaggctcctgatccttatcctgct
cttgcttcaatttctgagcaagatctaaaaatctctgaattggaatctgagaaccggaag
gtgaaagttgagcttgaagagttcagaacagaatcaatgcacttaaaaaatcagcaggca
acgataagaagacttgaagagcggaatagacaattagagcagcagatggaggaaaaagtg
aaagaaattgtggagatgaagcagcgcagtttagcagaagaaaaccagaaaactctagaa
gtcttaaaagacagggagcaatctttgcaagatcaattacggcaagctaaagaaagtgta
tcaaacatgcaaaaactgcatgaacttgcacagagccagctgtttgaacttcgtgctcag
tcagaggaagatagggcagcaaagcaatctgaggtcaaccttttgatggatgaagtagag
cgagcccaaactcggctttttagtctggagagagagaaggggcttctacgctcacaattg
cagtcaacaaatgaagagtcagaaaacaagagaagtgatgtagattcaaatgccatactt
gaaaactccctaagttccaaagaaaagataatctctgagctgaacatggaacttcacaat
attgaaactaccttatccaatgaacgagtgcaacatgtcaacgaaatcaagaagttgaat
tcgttgctcaatgaaaaggatgttgctcttgaggagatgaagaaagaacttaaagcaagg
ccaacagaaaagttggttgatgatttgcgtaagaaagtgaaaattttgcaggcagtgggt
tataattcaattgaggctgaagattgggaagcagctaccagtggggaagagatgagtaaa
atggaatctcttcttctcgacaaaaataagaaaatggaacatgaacttacacagctgaag
gtcaaactttccgagagaacatctttgctggaaacagctgaaggcaaaatagtagaactc
gcggaaaaggttaatgaacaacaaaagctgatacagaaattagaagatgatatattgaag
ggttatagttccaaagaaaagaaaggaactctttttgatgattgggatctttcagagagt
ggagggaatgaactttccgagaacacagatcagaaacaagtttccgcagatcaagaccaa
agctcaatgctgaaggtgatctgcaatcagcgtgatcgatttagggcacgtttgcgggaa
actgaagaagaaataaggcaattaaaggagaagataggggagctaacaacagaactggag
aaaacaaaagctgataatgttaaactttatggaaagattcgttatgtccaggattataac
caggagaaagtaatttctagaggatcaaagaagtatgccgaggatcttgaaagtggtttc
acctcagatgttgaatccaagtacaagaagatatatgaggatgatattaatccctttgca
gcattctcaaaaaaggagagggatcaaagatacaaggagctgggcttcagagacagaatc
acactcagcagcggacgttttcttctgggaaacaagtatgctcgaacgtttgcatttttc
tacacaattggtttgcatatcctagtgtttacttgtctataccgaatgtccgctctaagc
tacctcagccatggctctgaggaaactgccgtcgttgagaaaaacttgtaccgcccgcgt
ggatattag
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