Gossypium arboreum (tree cotton): 108456902
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Entry
108456902 CDS
T05776
Name
(RefSeq) heat shock cognate 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
gab04141
Protein processing in endoplasmic reticulum
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108456902
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108456902
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108456902
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108456902
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108456902
03009 Ribosome biogenesis [BR:
gab03009
]
108456902
03110 Chaperones and folding catalysts [BR:
gab03110
]
108456902
04131 Membrane trafficking [BR:
gab04131
]
108456902
03051 Proteasome [BR:
gab03051
]
108456902
03029 Mitochondrial biogenesis [BR:
gab03029
]
108456902
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108456902
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108456902
Spliceosome [BR:
gab03041
]
Complex B
Other components
Prp19 complex
108456902
Complex C
Prp19-CDC5 complex
108456902
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108456902
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP70 / DNAK
108456902
Membrane trafficking [BR:
gab04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108456902
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108456902
Proteasome [BR:
gab03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108456902
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108456902
Exosome [BR:
gab04147
]
Exosomal proteins
Proteins found in most exosomes
108456902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
DACNG
Motif
Other DBs
NCBI-GeneID:
108456902
NCBI-ProteinID:
XP_017611127
LinkDB
All DBs
Position
9:complement(80161034..80164121)
Genome browser
AA seq
646 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKN
QVAMNPLNTVFDAKRLIGRRFSDAAVQSDIKLWPFKVIPGSGDKPMIVVSYKGEEKQFAA
EEISSMVLIKMREIAEAYLGFTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVDAKNALENYAYNMRNTVKDEKIGAKLAAADKKKIEDAIDEAIQWLDNNQLAEADEFED
KMKELESICNPIIAKMYQGAGADMGGMDEDAPASGTGAGPKIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaggagaaggtccagcgattgggattgatctcggaacaacttattcttgc
gttggcgtttggcaacatgatcgtgttgagatcatcgccaacgatcaaggtaacaggacc
acgccgtcttatgttggctttactgataccgagcgtttgatcggtgatgcggcaaagaac
caggtcgccatgaaccccttgaacaccgtctttgatgcaaagaggttgattggtcgtaga
ttcagcgatgccgctgttcagagtgatattaaattgtggccattcaaggtcataccagga
tctggtgataaaccgatgattgtagtttcttacaaaggtgaggagaagcaatttgccgct
gaggagatctcgtctatggtcctcataaagatgcgtgagattgccgaggcttaccttggc
tttacggttaagaatgccgtggttactgtccctgcatactttaatgactctcagcgtcag
gctacaaaggatgctggtgtcattgctggtcttaatgtcatgcgtattattaatgagccc
actgctgctgccattgcgtacggtctagacaagaaggctaccagcgttggtgaaaagaat
gtattgatctttgatcttggtggtgggacttttgatgtctctcttcttaccatcgaagag
ggtatctttgaggtgaaggccactgctggagacactcaccttggaggtgaagattttgat
aatagaatggtgaaccatttcgtgcaagagttcaagagaaaaaacaagaaggacattagt
ggcaaccccagagctcttaggaggttgaggacttcttgtgagagggcaaagagaactctt
tcatccactgcccaaaccaccattgaaattgattccctgtacgagggtattgacttctac
tcaaccattacccgtgccagatttgaggaacttaacatggatctattcagaaaatgtatg
gaaccagttgagaagtgtttgagggatgccaagatggacaaaagcagcgtccatgatgtc
gtgcttgttggtggttctactagaattcccaaggttcagcaacttttgcaagatttcttc
aatgggaaggagctctgcaagagcatcaacccagatgaagctgttgcatatggtgctgca
gttcaagccgctatcttgagtggcgagggtaatgagaaggtgcaggatctgttgctcttg
gatgtcaccccactgtctctcggtttggaaactgctggcggtgtgatgactgttttgatt
ccgaggaacaccaccattcccaccaagaaggagcaggtcttctctacatactcagacaac
cagcctggtgtgttgatccaggtgtatgaaggtgagagagcaaggacaagagataacaac
ttgcttggtaaatttgagctctctggtatcccaccagctcccagaggtgtcccacagatc
acagtgtgctttgatattgatgccaatggtattttgaatgtgtccgctgaggacaaaacc
actgggcagaagaacaaaatcaccattacaaatgacaagggaaggctttcgaaggaggaa
attgagaaaatggttcaggaagcagagaagtacaagtcagaggacgaagagcacaagaaa
aaggtggatgcaaagaacgcgttggagaactacgcatacaacatgaggaacacagtgaag
gatgagaagattggtgccaaacttgctgcagcagataaaaagaagattgaagatgcaatt
gacgaggccatccaatggttagacaacaaccagcttgcagaggcagatgaatttgaagat
aagatgaaggaattggagagcatctgcaatcccatcattgctaaaatgtaccaaggcgct
ggtgctgacatgggtggcatggatgaggatgccccagccagtggaaccggcgcaggcccc
aaaattgaggaagtggactaa
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