Gossypium arboreum (tree cotton): 108456937
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Entry
108456937 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108456937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108456937
03036 Chromosome and associated proteins [BR:
gab03036
]
108456937
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108456937
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108456937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
VAPB_antitox
AbrB_C
Motif
Other DBs
NCBI-GeneID:
108456937
NCBI-ProteinID:
XP_017611183
LinkDB
All DBs
Position
9:complement(65577970..65591591)
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AA seq
1088 aa
AA seq
DB search
MDVDMETSPSYFDPQDHSAREKFRRYGKRYSNSSISPRQESGISKFNEAKLLYEGQIIHS
PTNAALLLENIKQEAESFDTDYFEETPAMERLASKRRPSSDGHRTAEIDNGVDSIRRLGS
HALKASKIEDDLLADNGDATFASFASLLDSAFHGVMPIPDLILQFERICRNVSESIRYES
NVRHRVVEDKLRRQKAQLLLDEAATWSLLWYLYGKVTDEPPEELILSPSTSHIEACQFVA
NDHTAQLCLRIVQWLEELASKALDLENKVRGSHVGTYLPNSGIWYHTQRFLKKGASAANT
IHHLDFDAPTREHAHQLPDDKKQDESLLEDVWTLLRAGRLEEACELCRSAGQPWRSATIC
PFGGLDLFPSTEALMKNGKNRSLQAIELESGIGHQWRLWKWASYCASERIFEQNGGKYEI
AVYAAQCSNLKRMLPICTDWETACWAMAKSWLEIQVDLELARSQPGRMEQLKSYGDGIDG
SPGGIDGTSQPSPGPESWPLQVLNQQPRDLSALLQKLHSGEMVHEAVTRGCKEQQRQIEM
NLMLGNIPLLLELIWSWIAPSEDDQNISRPRDPQMIRFGAHVVLVLRYLLAEEIKDTFRE
KLMTVGDRILHMYSLFLFSKHHEELVGIYASQLASHRCIDLFVHMMELRLNSSVHVKYKI
FLSAMEYLPFSQGDDSKGSFEEIIERLLSRSRETKAGKFDETSDVVEQHRLQSLQKALVV
QWLCFTPPSTITDVKDISAKLLMRALIHSNILFREFALISMWRVPAMPIGAHELLSFLAE
PLKQLSETPDTFEDFVSENLKEFQDWSEYYSCDATYRNWLKIELANAEVSPDELSVEEKQ
RAIMAAKETLDLSFLLLLRERNPWLISWVEHISESMEPLFLELHSTAMLRLPSGESMCPD
ATVCAALMSALYSSATEEVVSERQLTVNVAISSKDSYSIEVMLRCLAVEGDGIGPHILND
GGLLSAVMAAGFKGELARFQAGVTLEISRLDAWFSSKDGSLEGPATYIVQGLCRRCCIPE
VILRCMQVSVSLMESGNPFESHDQLIELVSSSETGFINLFSQQQLQEFLLFEREYSICKM
ELQEEPSS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacatggaaacgtctcccagctactttgacccccaagatcactccgctagg
gaaaagtttcgtcgttatgggaaaagatactcaaattctagcatatctccacggcaagaa
agtggcatttcgaagttcaacgaagctaagttgttgtacgagggacagattatccacagc
cctactaatgcagcacttcttcttgaaaacatcaaacaagaggctgagagctttgatact
gattattttgaagaaacacctgcaatggagcggttggcttctaagaggaggccatcaagt
gatggtcatagaacggcagagattgataatggtgttgattcaatccgcagattaggaagt
catgcactaaaagcttctaagatcgaggatgatttattggcagataatggagacgcgacc
ttcgcttcgtttgcatctctacttgattctgcttttcatggcgtaatgccaattcctgac
ctgattttacaatttgagagaatatgccggaatgtttcagagtcaattagatatgaatcc
aacgtacgccatagggttgtcgaggataaattgaggaggcagaaggctcaacttctgctt
gatgaggctgctacatggtctctcctgtggtatctttatggaaaagtgactgatgaacct
cctgaagagctcattctgtccccttcaacatcacatatagaggcttgccaatttgttgcg
aatgatcacacagcacaattatgcctccgcattgttcaatggctagaagaattggcttct
aaagcgctagatctggagaacaaggtgcgaggatctcatgttggtacctatcttcccaac
tctggaatttggtaccatactcagaggtttctcaaaaagggtgcctctgctgctaacact
attcaccacttagattttgatgctccaacacgggaacatgcccatcagctgcctgacgat
aaaaaacaagatgagtctctacttgaggatgtctggactctgttaagggctggaagactg
gaagaggcatgtgagctttgccggtctgctggacagccatggagatctgcaactatttgc
ccattcggagggttagacctatttccttctactgaagccctaatgaagaatggaaaaaat
agaagcctgcaagctattgaacttgagagtggcattggtcatcagtggcgcctttggaaa
tgggcttcctattgtgcatcagagaggatttttgagcaaaatggtgggaaatatgaaata
gctgtatatgctgcccaatgtagcaatttaaagcgcatgcttccgatctgtacggactgg
gagactgcctgttgggcaatggccaaatcatggcttgaaattcaggtagatctagaatta
gctcgttcacaacctggcaggatggaacaattaaaaagctatggagatggtattgatgga
agtccaggaggaattgatggtacctcgcagccttcacctggacctgaaagttggccattg
caagttttgaaccagcaaccacgagacctttccgctcttcttcagaaacttcattcaggt
gaaatggtgcatgaagcagtaactcggggatgcaaggaacagcaacgtcaaattgagatg
aatctaatgttagggaatataccacttctccttgagcttatatggtcgtggatagcacct
tcagaagatgatcaaaacatctccaggcctcgtgatcctcagatgattcggttcggtgcg
catgtagtgcttgttcttagatatctacttgctgaagaaattaaagataccttcagggaa
aagcttatgactgttggtgatcgtattcttcacatgtattcattgtttctattttcaaag
catcatgaagaattggttggcatttatgcttctcagcttgcaagtcatcgttgcattgac
ctctttgtgcacatgatggagcttaggcttaatagcagtgtacatgtcaaatataaaatc
ttcctttctgccatggagtatttaccattttctcaaggggatgattcgaaaggaagcttt
gaagaaattattgagaggcttttgtcacgatcacgagaaaccaaagctggaaaatttgat
gaaacatctgacgttgtggagcaacataggcttcagagtcttcaaaaagctttggttgtc
caatggctctgcttcacacctccctccacaattaccgatgttaaagatattagtgccaaa
cttcttatgcgagcattaatacacagcaatatattatttagggagtttgctctgatttct
atgtggagagtcccagcaatgccaataggtgcacatgaattgcttagttttcttgctgag
cctttgaagcagctttctgaaactcctgatacttttgaggattttgtttctgagaatctg
aaagagtttcaagactggagtgaatactactcctgtgatgcaacgtatcgcaactggctc
aaaattgaattagcgaatgcagaagtttctcccgacgaactttcggtagaggaaaaacaa
agagcaataatggcagccaaagagacgttggatttatcttttttattgctactgagggaa
agaaacccatggcttatttcttgggtggaacatattagtgaatcgatggaacctctattt
cttgaattgcattctactgcaatgctccgcctgccttctggtgaatccatgtgtccagac
gctactgtttgtgctgcattaatgagtgcactttactcttctgcaactgaggaagttgtc
tcagaaagacagttaacagtaaatgttgccatttcttcaaaagacagctacagcattgag
gtaatgttgcgctgcttggcagtggagggtgatggaattggtccacacatcctcaatgat
ggtggccttctcagtgctgttatggcagctggcttcaaaggtgagcttgcgagatttcaa
gcaggagttacattggagatatcccgattagatgcttggttttcaagcaaagatggttcc
ttggaagggcctgcaacgtatattgtgcagggcctctgtcgtaggtgttgtattccagaa
gtcattctccgatgcatgcaggtttctgtttcactcatggagtcaggtaatccttttgaa
agccatgaccagttgattgagctagtctcgagttcggagacagggttcatcaatctcttc
agtcagcaacaattgcaggaatttttattgttcgagagggagtattccatatgcaaaatg
gagcttcaagaggagccttcctcgtga
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integrated database retrieval system
