Gossypium arboreum (tree cotton): 108456945
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Entry
108456945 CDS
T05776
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108456945
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108456945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_NusA_2nd
KH_PNO1_2nd
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
108456945
NCBI-ProteinID:
XP_017611198
UniProt:
A0A0B0MXV8
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Position
9:complement(65177372..65184095)
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AA seq
628 aa
AA seq
DB search
MGESGKRNRGQRDNDGDSRNQKRRLNDRDDKSNNELVVYRILCPDEVIGSVIGKGGKVIN
SIRQETRAKVKVVDPYPGSKYRVITIYCFVKEKEEIEVEDEFYNKGPLCASQDALLRVHT
VVANAIAVMGDSEKKRTDKYREECQILVPSSQSSNIIGKAGSTIKKLRGKTRANIKVTAK
DAGDPSHSCAMDFDNFVQITGEPEAVKKALFAVSAIMYKFSPREEIPLETTVAEAPPAQS
IIIPSDVPIYPPGGLYPNPDPVLPSRSVPPILGAAHVSDLQGYGDTGSTWPVYSSALPLV
SGFSGASRSEELIVRVLCPFDKIGRVIGRAGSTIKSIRQASGARIDVDDTKADRDDCIIT
VIATESPDDLKSMAVEAVLLLQGKINDEDHETVTMRLLVPSKVIGCIIGKGGSIINEIRK
RTKADVRISKKDKPKCADANDELVEVAGEVSSVRDALIQIVLRLRDDVLKEKDGGHNPSV
GADALYSGGASLSVSSLLSSVPPVATLAFDQRAESGSDLGVLSSSSLYGYGTLPMGENGY
GSMPSYSSKLYGGLPASSTLEILIPSNAVGKVMGKGGLNLANIRKLSGAMIEISESKSSR
GERVALITGTPQQKREAENLIQAFIMAT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagagtggtaagcgtaatcgaggtcaaagagataatgatggggatagtaggaat
cagaagagaagattgaatgatagagatgataaaagcaataatgaacttgttgtttataga
atactttgccctgatgaggtgattgggagtgtcattggtaaaggtggtaaagtcataaat
tcgattaggcaagagacgagggcaaaggttaaggtggttgatccataccctggttctaag
tatagggttattacgatatattgttttgttaaggagaaggaagaaattgaggtagaggat
gaattctataacaaagggcctttatgtgcttctcaagatgctctgcttcgagttcacact
gtggttgcaaatgccattgctgtcatgggggattctgaaaagaaacggacagataaatac
agggaggaatgccaaattcttgtcccatctagccaatcttctaacatcattgggaaggcg
ggttcaactattaagaaactgaggggcaagactcgggccaacattaaagttactgctaag
gatgctggtgatccaagtcattcttgtgccatggattttgacaacttcgttcagataact
ggtgaaccggaggctgttaagaaagcactttttgctgtttctgcaatcatgtacaagttc
agtcccagagaagaaatccctcttgagacaacagtggcagaagctcctccagctcaaagt
atcattatcccatcagatgttcctatttatcctccaggtggcttatatccgaatccagat
cctgttcttccttctagatcagttccacctatattgggtgctgcacatgtgtcagatctt
cagggatatggtgatacagggagtacctggcccgtgtactcatctgctcttccccttgtt
tcggggttttctggtgcctcccgatctgaagagttgatagtcagagtactctgcccattt
gacaagattgggcgtgtcattggaagggcagggagtactatcaaaagtataaggcaggca
agtggtgctcgtatcgacgttgatgatacaaaggctgatcgcgatgactgtattataact
gtaatagctacagagtcacctgatgatttaaaatccatggctgttgaagctgttctattg
ctgcaagggaagattaatgatgaagatcatgaaactgtaactatgaggctcctcgttcca
tctaaagttattggttgtattattggaaaaggtggttctattataaatgaaattcggaag
agaactaaagctgatgtacgtatatcaaaaaaggataagccgaagtgcgctgatgccaat
gatgagcttgttgaggttgctggagaagttagtagtgttagagatgcacttatacagatt
gttctaaggctccgagatgatgttttgaaagaaaaagatggtggtcataacccttctgta
ggtgctgatgctctctactcgggtggtgcaagtctttcagtatcatctctcttgtcttct
gttcctccagttgctactttggcttttgatcaaagggctgaaagtggaagtgaccttggt
gttctttcttcaagcagcctctatggatatggaaccctgccaatgggggaaaacggctat
gggtccatgccctcatattcatcgaagctctatggaggcttgcctgcatcttcaactctt
gaaatattgatcccttcaaatgcagtcggtaaagtgatgggcaaaggagggctcaattta
gccaacataagaaagttatccggggcaatgattgaaatttctgaatccaaatcctctcga
ggggaacgtgtagctcttataactggcactccacagcagaagcgtgaagctgaaaacttg
attcaagcatttataatggctacttga
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