Gossypium arboreum (tree cotton): 108456961
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Entry
108456961 CDS
T05776
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04141
Protein processing in endoplasmic reticulum
gab04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108456961
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108456961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gab03110
]
108456961
04131 Membrane trafficking [BR:
gab04131
]
108456961
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gab04091
]
108456961
Chaperones and folding catalysts [BR:
gab03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
108456961
Membrane trafficking [BR:
gab04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108456961
Autophagy
ER-phagy
Other ER-phagy associated proteins
108456961
Lectins [BR:
gab04091
]
L-type lectins
108456961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Phage_holin_2_1
CFAP143
Motif
Other DBs
NCBI-GeneID:
108456961
NCBI-ProteinID:
XP_017611222
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All DBs
Position
9:89350476..89353267
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AA seq
532 aa
AA seq
DB search
MMIMRRYALLLLLAFASLQLLCFAADVDVVFYDSFEESFDGRWIVSDKDDYKGVWKHSKS
EGHDDYGLLVSEMAQKYAIVKELDEAVNLKEGTTVLQFETRLQSGLECGGAYLKYLRPQD
AGWKPNEFDNESPYSIMFGPDKCGATNKVHFILRHKNPKSGEYIEHHLKYPPSVPSDKLT
HVFTAILKPDNEVSILVDGEEKKKASFLSAEDFEPPLIPSKTIPDPDDKKPEDWDERAKI
PDPGAVKPEDWDEDAHMEIEDEEAVKPEGWLDEEPEEIDDPEATKPEDWDDEEDGEWEAP
KIENPKCETAPGCGEWKRPMKRNPAYKGKWSPPLIDNPSYKGIWKPQEIPNPNYFELEKP
DFDPIAAIGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDEAAD
SARLADFQRKVFDVLYKVADIPFLSKYKHQILDLIEHAETQPNLTIGVLVSIVVIILTIF
FKLIFGGKKQPIVEKKPEVAETSNGEGSSGEKAEEAEKEEAAAAPRRRRRDN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgataatgaggcgttacgctcttcttctcctattagctttcgcttcgctgcaactc
ctctgcttcgccgctgatgttgacgtggtgttctatgattcatttgaagagtcatttgat
ggacgatggatcgtttctgataaagatgattataaaggcgtgtggaagcattccaagagc
gaggggcatgatgactatggtcttctcgtgagtgagatggcacagaagtatgcaatagtg
aaagagcttgatgaggctgtgaatctcaaagaaggtaccactgtgcttcagtttgagact
cgcctacagagtggactggaatgtggtggtgcatatttgaaatatcttcgtcctcaagat
gctgggtggaagcctaatgagtttgacaatgaatccccttactctatcatgtttggaccc
gacaaatgtggggccacaaacaaggtgcacttcatcctgaggcataagaatcctaaaagt
ggggaatacattgaacaccatctgaaatacccaccttctgtcccatctgacaagcttact
catgtcttcactgccatattgaagcctgacaatgaggtcagcattctggttgatggtgag
gaaaagaagaaggctagcttcctttcagcagaagattttgagcctccacttatcccttcc
aagacaattcctgatcctgatgataagaagcctgaggactgggatgagagagctaagatt
cctgatccaggtgccgtgaagccagaggattgggatgaggatgcacacatggaaattgaa
gatgaggaggctgtgaaacccgaaggttggttagatgaagaacccgaggagattgatgat
ccggaggcaaccaagcctgaagattgggatgatgaagaagatggtgagtgggaagccccc
aaaattgagaacccaaagtgtgagacagcccctggttgtggcgaatggaagaggccaatg
aagaggaatccagcttataaaggaaaatggtctcctccactaattgacaatcccagttac
aagggtatttggaagcctcaggagattccaaaccccaactactttgagcttgaaaagcct
gactttgatcctattgctgccattggtattgagatttggacaatgcaagatggtatatta
tttgacaatattttgatagccaaaaacgacaaggttgctgagtcatatcgggagaccacg
tggaagccaaagtttgaggttgagaaggaaaaacagaaggctgaggatgaagctgccgat
tctgccaggctcgcagactttcagaggaaggtttttgatgtcttatacaaggttgctgac
attcctttcttaagcaaatacaagcatcaaattctcgatcttattgagcatgctgagaca
cagccgaacctcaccattggtgtcttggtctctattgtggtgattattctcacgattttc
ttcaagctcatttttggtgggaagaaacaaccaatagtagagaagaaaccagaggttgct
gaaacatcaaatggtgaaggaagcagtggagaaaaggctgaagaggcggagaaggaagaa
gctgctgccgctcctcgccgaaggcgccgtgacaattga
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