Gossypium arboreum (tree cotton): 108457007
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Entry
108457007 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108457007 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108457007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108457007
03012 Translation factors [BR:
gab03012
]
108457007
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108457007
Translation factors [BR:
gab03012
]
Eukaryotic type
Release factors
108457007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
108457007
NCBI-ProteinID:
XP_017611288
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All DBs
Position
9:82051290..82060634
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AA seq
514 aa
AA seq
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MDIEAEIRALQLDSAEDNNATLIPEDAKPEEVEMTDKVEEEGMTDEVDTKSQPVQAEPKV
KDKEVADMDCAEVPDEMESQKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYE
KEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAQFETETTRFTILDAPGHKSYVPNMI
SGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDHTVNWS
KERYDEIESKMVPFLRSSGYNVKKDVQFLPISGLVGTNMKTRVDKNICPWWNGPCLFEAL
DSVEIPVRDPKGPYRMPVIDKFKDMGTVVMGKVESGSICEGDSLLVMPNKAPVKVLAVYC
DEDKVRRAGPGENLRVRLSGIEEEDISSGFVLSSVVKPIPAVTEFTAQLQILELLENAIF
TAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRIQVNSLICIE
KFSDFPQLGRFTLRTEGKTIAVGKVTDLPSRSSA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggctgagatccgtgcactgcagcttgactctgctgaagataataatgcc
acgctcattcctgaagatgcaaaaccagaagaagttgaaatgacagataaggtggaggag
gaaggtatgacagatgaggttgatactaaatctcagccagtccaggctgagccaaaagtg
aaagacaaggaagtagctgatatggattgtgcagaagtaccagatgaaatggaatcacaa
aagaagcgccacttgaatgtggtctttattggtcatgttgatgctggtaagtcaacaact
ggaggccagatactcttcctcagtggtcaggttgatgaccgtacgatccagaagtatgag
aaagaagctaaggataaaagtagagaaagctggtatatggcatatattatggacactaat
gaagaggagagggttaagggtaaaactgttgaagttggaagagcacagtttgagactgag
acaactagatttaccattttggatgcaccaggtcacaagagttatgtcccaaatatgatc
agtggggcatctcaagctgatattggtgtgcttgtgatttctgctcgtaaaggggaattt
gaaactggatatgagaggggtgggcagactcgtgaacatgtgcagcttgcaaagactttg
ggtgtgtcaaagctacttgtagtagtcaataagatggatgatcacactgtcaactggtct
aaagaaaggtatgatgaaattgaatcaaagatggtaccttttctcaggtcatctggctac
aatgtgaagaaagatgtccagttcctaccaatatctggtcttgttggtactaacatgaaa
acaagagtagataagaatatatgtccttggtggaatggtccctgcctatttgaggccctc
gattctgttgaaattcctgtcagggatccaaaaggtccatataggatgcctgtaattgac
aaatttaaagacatgggaactgttgttatgggaaaggtagaatctggaagcatatgtgag
ggtgattccttattagttatgccaaacaaggctccagtgaaagttttagctgtatactgt
gatgaggataaggttaggcgtgctggacctggtgaaaatctacgggttaggttatctggg
attgaagaggaggacatatcgtcaggttttgtcttgtcaagtgttgtaaaaccgatacct
gcagtcactgaatttacagcccagctgcagatccttgaattacttgagaatgctattttt
acagctggctataaggctgtcttgcacattcattctgttgttgaggaatgcgagatagtt
gagctactacagcaaattgatccaaaaacaaagaaacccatgaaaaagaaagttcttttt
gtgaagaatggtgctgttgttgtttgtcgtattcaggtcaacagcctgatttgcattgag
aagttctcagattttcctcaacttgggaggttcactcttcgcactgaagggaaaaccatt
gcagtaggaaaagtcactgatcttccttcacgcagtagtgcttaa
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