Gossypium arboreum (tree cotton): 108457036
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Entry
108457036 CDS
T05776
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gab04990
]
108457036
Domain-containing proteins not elsewhere classified [BR:
gab04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108457036
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_SPT8
Beta-prop_DCAF12
KNTC1_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
108457036
NCBI-ProteinID:
XP_017611327
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Position
11:310176..316308
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AA seq
609 aa
AA seq
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MPELAETYACVPSTERGRGILISGDPKSNKVLYTNGRSVIILDLNNPLNVSVYGEHAYPA
TVARFSPNGEWVASADVSGTVRIWGAYNDHVLKKEFKVLSGRIDDLQWSPDGMRIVACGD
SKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KQSQREHANFVNCVRYSPDGSKFISVSSDKKGIIFDGKTAEKIGELSSEDPHKGSIYAAS
WSPDDKQVLTVSADKTAKVWDISEDGSGKLKKTLTCSGSGGVDDMLVGCLWQNDHLVTVS
LGGTISIFSASNLEKSPLQLSGHMKNITSLAVLKSDPKCILSSSYDGLIVKWVQGLGYSG
KLQRKENSQIKCFAAAEEEIVTSGFDNKIWRISLHGDQCGDGDSVDIGSQPKDLSLALLS
PELALVTTDSGVVMLRGTKVVSTINLGFAVTALVVAPDGSEAIVGGQDGKLHVFCIVGDT
LKEEAVLEKHRGAITVIRYSPDFSMFASGDANREAIVWDRVSREVKLKNMLYHTARINCL
AWSPNNSMVATGSLDTCVIIYEVDKPASSRMTIKGAHLGGVYALAFTDEHSVVSSGEDAC
VRVWKLTLQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctcgcggaaacctacgcttgtgtcccatcaacagagcggggccgtggaatc
ctgatctcgggcgacccaaaatccaacaaggttctttacacaaatgggcgatccgtcatt
attctcgaccttaacaatccactcaacgtctccgtttacggtgagcatgcgtatccggcc
acggtggcacggttctcgccgaacggggagtgggtagcctcggctgacgtgtccggcacg
gttaggatctggggggcctacaatgaccacgtgttgaagaaagagttcaaggttttgtcg
ggtcggattgatgatctacaatggtctcctgatgggatgcggatcgtcgcctgcggtgat
agcaaagggaagtctctcgttcgcgcttttatgtgggattcaggcactaatgtgggtgag
tttgatggccattcaagacgagttctaagttgtgcctttaagccaacaagaccatttcgc
attgtgacttgtggagaggactttttggtgaatttctatgaaggcccaccctttaaattc
aagcaatctcaaagagagcatgccaattttgtaaattgtgtaagatattctcctgatgga
agcaaattcatctctgtaagttctgataaaaagggtattatatttgatggaaaaactgcg
gagaagattggagagttgtcgtctgaagatccccacaaaggtagcatttatgcggccagc
tggagtcctgatgataagcaggtgctgacagtatctgctgataagactgcaaaagtatgg
gatatctctgaggatggtagtgggaagttgaagaaaacattgacatgttctggctcaggt
ggagttgatgatatgcttgttggatgtctttggcagaacgatcatcttgtcactgtatct
ctaggtggcacaattagtatattttctgctagtaatcttgaaaaatccccactccagtta
tctggacacatgaagaatatcacttcattagctgtcctaaaaagtgacccaaaatgtata
ctgtctagtagttatgatgggctaatagttaaatgggttcaaggtttgggatatagtggt
aaattacagaggaaagagaattctcaaattaaatgctttgctgctgctgaagaagagatc
gttacttctggatttgacaataagatatggagaatttctcttcatggggatcagtgtggg
gatggagattcagttgatattggcagtcaaccgaaggacttgagccttgcccttctctct
cctgaacttgctttggttacaactgactccggagttgttatgttgcgtggtacgaaagtg
gtatcaaccataaaccttggttttgctgtgacagcattagtggttgcacctgatggaagt
gaagctattgttggtgggcaggatggaaaattgcatgtattttgtatagtaggtgatacc
ctcaaggaagaggcagtacttgagaaacaccgaggtgcaattactgtcattcgttactca
ccagatttctcaatgtttgcatctggagatgcaaatcgagaagctatagtctgggatcgt
gtctctcgagaggtaaagcttaaaaacatgttgtaccacactgctcggataaactgtctt
gcttggtctcccaataacagcatggttgctactggatcacttgacacctgtgtaataatt
tatgaggttgacaagcctgcatctagccgaatgaccataaaaggagctcatttaggtgga
gtttatgcattagcctttactgatgaacacagtgtggtaagctctggtgaggatgcttgt
gttcgagtgtggaaattgaccctgcaatga
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