Gossypium arboreum (tree cotton): 108457052
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Entry
108457052 CDS
T05776
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108457052
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Gene cluster
GFIT
Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
108457052
NCBI-ProteinID:
XP_017611351
UniProt:
A0A0B0MWE3
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Position
11:234458..238818
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AA seq
768 aa
AA seq
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MQVDMAKSDWVNDKCKRGKNEAPLSLSLSLSLSLFLFQSLEWISRFDRLLISCDFFSPPK
SQVFFYLFPQQIQCSDKSSLFPTHTYIIIIIMSRSSCHLFLFLFLLLFSLFPFPLLARPF
VLVLSQDDLKDVQNDDASPLDSDSSWDDDDFGGTHVKPDDELDPGSWRRLFEPPTTLLSP
SHDTSLDSYYAAVQKIISASNNGDARLMEEAAAEIETAANADGDPHARSVLGFLYGMGMM
RERNKAKAFLNHYFAAEGGNAQSKMALAYTYSRQDMHEKAVKLYAELAETAVNSFLISKD
SPVIEPIRIHNGAEENKEALKKSRGEDDEDFQILEYQAQKGNAGAMYKMGLFYYFGLRGL
RRDHSKALMWFLKAVDKGEPRSLELLGEIYARGAGIERNYTKALEWLSLASEHGLYSAYN
GMGYLHVKGYGVEKNYTKAKEYFDKAADNEDAGGHYNLGVMYLKGIGVKRDVKIACKCFI
VAANAGQPKAFYQLAKMFHTGVGLKKNLPMATALYKLVAERGPWSSLSRWALESYLKGDM
GKAFLLYSRMAELGYEIAQSNAAWILDKYGERSMCMGESGACTDAERHQRAHSLWWQASE
QGNEHAALLIGDAYYYGRGTVRDYERAAEAYKHAKSQSNAQAMFNLGYMHEHGQGLPFDL
HLAKRYYDQALELDPAAKLPVTLALASLWVRKNYADSFLVHIIDSLPEVYPRVEEWVENV
IMEEGNATILTLFVCLLTVLYLRERQRRHAIAAAGAHEPNEHVVPAAR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttgacatggcaaaaagtgattgggtgaatgacaaatgtaaacgtggcaagaat
gaagcacctctctctctctctctctctctatctctatctctgtttctctttcagtctctg
gaatggatatctcgattcgaccgtcttctgatctcatgtgacttcttctccccccccaaa
tcacaggtattcttttaccttttcccccaacaaatccagtgctccgacaaatcctccctg
tttccgacacacacctacatcatcatcatcatcatgtctaggtcaagctgccatctcttc
cttttcctcttcctcctccttttctcccttttcccgtttcccctcctcgcccgccctttc
gttctcgttctctcccaagacgacctcaaggatgtccaaaacgacgacgcttcccctctc
gattccgattcttcttgggacgacgatgacttcggcggtactcatgttaagcctgatgat
gagctcgatcctggatcttggcgccgtctcttcgagccacctactacccttctctcccct
tctcatgatacttccctcgattcttactacgccgccgtccaaaaaatcatctccgcttcc
aacaacggagacgccaggttgatggaggaagccgcggctgagatcgagaccgctgctaat
gcggacggtgatccgcacgctcgttcggtgttaggttttttgtacgggatggggatgatg
cgtgagagaaacaaagctaaagcatttttgaatcattatttcgctgccgaaggtggtaat
gcccagtccaagatggctttggcttacacttactcgcgtcaagatatgcatgaaaaagct
gttaaattatatgctgaactggcagaaacagcggtaaacagtttcttgatatccaaagat
tcgccggtaatagaaccgattaggatacacaatggagctgaggagaacaaggaagctttg
aagaaatcaagaggtgaagacgatgaagattttcagatattggaatatcaagcacagaaa
gggaatgccggtgctatgtacaaaatgggtcttttttactatttcggattgagagggttg
cgccgtgatcattccaaggctttgatgtggtttttgaaagctgtggataaaggggagcct
aggtctcttgaacttcttggtgagatttatgctagaggggctggaattgaaaggaattat
accaaggctcttgagtggctttcacttgcatccgaacatgggctttattcagcttacaat
gggatgggctatttacatgttaaaggctatggtgtggagaagaactataccaaagcaaaa
gaatacttcgacaaggctgctgataatgaagatgctggtgggcactataatttaggagta
atgtaccttaaagggatcggagtgaagagggatgtgaagattgcttgtaagtgttttatt
gtggcagccaatgcaggtcaaccaaaggcgttttatcagttggctaagatgtttcatact
ggtgttgggcttaaaaagaatcttcctatggctactgcattatacaagctagttgccgaa
cggggaccatggagttccctctctagatgggcacttgaatcatacctaaaaggtgacatg
ggcaaagcattcctcttgtattctaggatggctgagctaggttacgagatagcacagagt
aatgctgcatggatccttgacaagtatggtgagcgcagcatgtgcatgggtgaatctggg
gcttgcacagatgcagaaaggcatcaacgtgctcattctttgtggtggcaagcttccgag
cagggtaacgaacatgcggcattacttattggggatgcatattactatggcagaggaact
gtgagggattatgagcgtgcagctgaagcttacaaacatgcaaaatcccaatcgaatgct
caagctatgttcaacctgggatacatgcatgagcatggccaaggacttccttttgacctc
catcttgctaagcggtactatgatcaggcattagagctagatcctgcagcaaagttgcct
gtcacactggcactagcaagtttgtgggtacgaaagaactatgctgacagtttcctggtc
cacataattgattccctgcctgaagtttatcctagagttgaagaatgggtggagaatgtg
atcatggaggaaggaaatgcaacaatattgacactatttgtctgtctactcactgttcta
tatctgcgtgagcgacaacgcaggcatgctattgctgctgcgggggcacacgaacctaat
gagcatgttgtacctgctgcacgctaa
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