Gossypium arboreum (tree cotton): 108457058
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Entry
108457058 CDS
T05776
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108457058
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108457058
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108457058
Protein phosphatases and associated proteins [BR:
gab01009
]
HAD phosphatases
Fcp/Scp phosphatases
108457058
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108457058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
108457058
NCBI-ProteinID:
XP_017611364
LinkDB
All DBs
Position
3:7957180..7961268
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AA seq
697 aa
AA seq
DB search
MNKGSSSMAKDQSISVSEAVHKIQLHLLDGIRDEKQLISSGSLISRSDYEDVITERSISN
TCGYPLCQNPLPSEPRRRGRYRISLKEHRVYDLQETSRFCLADCLINSRAFAGSLQEERC
SVLNHAKLNAILSLFDDVDLNDKDLGKNGDLGFSNLKIKENEEIKAGEISSVGPSNAIEG
YVPQRELVSKPSSSKNSKNGVFDSSSSKLGDIKGDYFVNNEIDFTSAVIMNNEYTTSKNP
GSLRQSQRTKPSSMKDVINEMDFTSEIIMNDEYTVSKTPPGSRQGSSGSKLEKTEGKGVC
KDFEEKCMRSESSSALTKEDSGIVQMPSTKCVDQSGLDTINAEAEKETHSDKAMASSGVV
LKSSLKPAGAKKLNRSVTWADKKNVDSARKGSLCEVKEMDAQKGDSENIGRAEDGDADDK
MLRFASAEACAMALSKAAAAAAVASGDSDVNDAVSEAGLIILPHPLEADKEEKVENIDTL
EADPEPEEGPVKWPTKPGIPRSDFFDPEDSWFDAPPEGFSLTLSTFATMWNALFEWITSS
SLAYIYGRDETFHEEYLSVNGREYPQKIVLRDGRSSEIKETLAGCISRALPAIVTALRLP
IPISTLEQGMGRLLDTMSFVEALPAFRMKQWQVLVLLLIDALSVCRIPALTPHMTNGRML
LHKVLDGAQISLEEYEVMKDLIIPLGRAPHFSAQSGA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggttcatcatcaatggcgaaagatcagtcaatctcagtttcagaagcagta
cacaagattcaactccatctccttgacggaatccgagacgagaaacaactaatctcctct
ggttccttaatttctcgaagcgactatgaggatgtcataaccgagaggtcgatttccaac
acttgcggttaccctctctgccaaaaccctttaccttccgaaccccgtcgaagaggccgt
tatcgaatctctttgaaagagcaccgagtttacgatttacaagaaaccagccgcttttgc
ctcgccgattgcctgattaatagccgagctttcgctgggagtttacaagaagagaggtgt
tccgttttgaatcatgcgaaacttaatgcgattttgagtttatttgatgacgtggatttg
aacgataaggatttggggaagaatggggatttagggttttcgaatttgaagattaaagaa
aatgaggaaataaaagctggggaaatttcttcggtgggtccttccaatgctattgaaggc
tatgttccacaaagagaattggtttctaagccttcatcttctaagaacagcaaaaatgga
gtgtttgattctagcagttccaagctgggtgatatcaaaggagattattttgtcaataat
gagatagattttactagtgccgtaattatgaacaatgaatacaccacttctaagaatccc
ggtagtcttagacagagtcaaagaacgaagccgagtagtatgaaagatgtgattaatgag
atggactttactagtgaaataatcatgaatgatgaatatactgtttccaagacacccccg
gggtcaagacagggttcttctggttcgaaattggaaaaaacagaagggaaaggagtttgt
aaagacttcgaagaaaaatgtatgagatcagaatcctcctctgctttgacgaaagaggat
tctggcattgtacaaatgccttcaactaaatgtgtcgatcagagtggtttggatacaatt
aatgctgaagcagagaaggaaacccattctgacaaggccatggcatcaagtggggttgtg
cttaaatcctctcttaaacctgctggagcaaagaaacttaatcgctcagttacttgggct
gataaaaaaaatgttgatagtgctcggaaagggagtctttgtgaagttaaagaaatggat
gcacagaaaggagattctgaaaatattggcagagcagaagatggtgatgctgatgataaa
atgttacgatttgcatccgcagaagcttgtgctatggctttgagcaaggcagcggcagcg
gcagctgtggcatctggagattctgatgtcaatgatgctgtttctgaagctgggctgatc
atattgccacatccacttgaggcggacaaggaggagaaagtggagaatattgataccctt
gaagcagatcctgaaccagaagaaggccctgtaaagtggccaacaaaacctgggattcca
cgctctgatttttttgacccagaggactcgtggtttgatgctccccctgagggtttcagt
ttaactctgtcaacttttgcaacaatgtggaatgcgctttttgaatggataacatcatct
tctttggcttatatatatgggagagatgaaactttccatgaagagtacctgtcagttaat
gggagggagtatccgcagaagattgtcttacgagatggtcgttcttctgaaattaaagaa
actcttgctggttgtatttctcgtgctttacctgctattgttactgctctcagactgcct
ataccgatatctactttggagcagggaatgggccgcctgctagatacaatgtcttttgtg
gaagcacttccagcattcagaatgaaacagtggcaagtacttgttcttctattaattgac
gccctttcagtttgtagaataccagccctcactccacacatgactaatgggaggatgctt
cttcacaaggtgctggatggtgcccagataagtttggaagaatatgaggttatgaaggat
ctaataataccacttggccgagcacctcacttttctgcacagagtggagcttga
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