Gossypium arboreum (tree cotton): 108457111
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Entry
108457111 CDS
T05776
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108457111
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108457111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
108457111
NCBI-ProteinID:
XP_017611456
UniProt:
A0ABR0NT45
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All DBs
Position
9:complement(66106940..66113026)
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AA seq
676 aa
AA seq
DB search
MASYRPFPPPQSFPPPPQNQNPLPPQQQQQQQYGQNYNHMNPNSNYGYPPRPPQQPPPPP
PPQQQYSYPPPPPPPDSSYPPPPPPPLPSMPQNTINSQPPMYYPPSQYSSQYGSQAMQPP
PPPPPPASPGSSIPPPPPPPSSPPPPPPPNENVGKTGLNERNKGGNRDYSGSGRREHGHS
NHGVGGREQKPMVPPVKKPNGPPGRVETEEERRLRKKREFEKQRQEEKQRQQIKESQKTQ
MMTSGKAHGSIVGSRMGDKRATLFLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLM
SLKKDKDRFTKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSIRLPLAPEDEELL
RDDAAITPVKRDGIRRKERPTDKGVSWLVKTQYISPLSMESTKQSLTEKQAKELRELKGG
RNLLVNLNNRERQIKEIVASFEASKLRPVHATNKNLEPVEVMPLLPDFDRYDDQFVMVAF
DNAPTADSEIFSKLHGSVRDEHESRAIMKSYQAPSSDPVNPEKFLAYMVPSLGELSKDMY
DEHEDITYSWVREYHWDVRGDDANDPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRSG
DEIEHFPVPARITVRRRPTVAAIELHEPEVYSNSRGGISSSKMARLDAEDGLGRPHKLSR
HQDIDQYSGAEDDLSD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtataggccatttcctcctccacaatcattccctccaccaccgcagaatcaa
aaccctcttccaccccaacaacaacagcaacagcagtatggtcaaaattacaatcacatg
aatccaaattcgaattacggttaccctcctagaccaccccaacaaccaccaccacctccg
cctccacaacagcaatattcttatcctcctccacctccgcctccagattcttcctatcca
cctcccccacctcctcctttgccttcaatgccacaaaatacgatcaattcacagccacca
atgtactatccgccttcacagtattcatcacagtatggtagtcaagcaatgcagccacct
cccccaccgcctcctccggcttctccgggttcttcaatccctccaccaccacctcctccg
agttctcctcctccacctcctcctccaaatgagaatgttgggaaaacggggttgaatgag
cgcaataaaggagggaatagggactattcaggttctggaaggcgtgaacatgggcattcc
aatcatggggttggaggtagagagcagaagccgatggtgcctcctgtgaagaagccaaat
ggacctccaggaagggtggagaccgaggaagagagaaggttgaggaagaagagggagttt
gagaagcaaaggcaagaggagaaacaaaggcagcaaattaaggagtcccagaagacccag
atgatgacttctgggaaagcgcatggttcaattgtagggtcacggatgggagataagaga
gctacactgtttctgagtggcgagaggattgagaacaggctaaagaagccgactacattc
ttgtgcaagttgaaattccggaatgaacttccagatcctagtgcacagcccaaactcatg
tctttgaagaaagataaagatcgatttacaaaatataccatcacttctctggagaaaatg
tacaagcctaagctttttgttgagccagatcttgggataccactggacctgcttgacctc
agtgtatacaatcctcctagtattagactgcctctcgccccagaggatgaagagctcttg
cgtgatgatgctgctataacccctgtaaaaagagatggtataagacgaaaagaaagaccc
actgacaaaggtgtttcttggctggttaaaacacagtacatatctccacttagtatggaa
tcaacaaagcagtctttgactgaaaagcaagcaaaagaactgcgagaacttaagggaggc
cgcaatcttttggtgaaccttaacaacagggaaaggcaaatcaaagaaattgtggcatca
tttgaggcatccaaattacgtcctgtccatgcaaccaataaaaacttggagcctgttgaa
gttatgcccctcttacctgattttgatcggtacgatgaccagttcgttatggtggcattt
gataatgctcctacagctgactcagaaatcttcagcaagctgcatggctctgtacgtgat
gaacatgaatcgagggccattatgaaaagttatcaggcaccgagctcagatcctgttaat
cctgagaaatttttagcatacatggtgccgtctcttggtgagctatcgaaggatatgtat
gacgaacacgaagacatcacatattcttgggttcgagaataccattgggatgtacgtggc
gacgatgcaaatgacccaacaacataccttgtttcgttcgatgaaggagaagctcgctat
gtgcctcttcccacgaagcttaatttaagaaagaagagggccagagagggaagatcaggt
gatgagattgaacattttcctgtacctgctagaattactgtgaggagaagaccaacagtt
gcagcaatagaactccacgagccagaggtttattccaactcaaggggtggtatttcaagc
tcaaagatggcaaggctagatgcagaagatggccttggaagaccgcacaagctttcacga
caccaagatattgaccaatatagtggagctgaagatgatttgtctgattga
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